STRINGSTRING
mttp mttp apoa1a apoa1a cetp cetp apoeb apoeb apoba apoba apoa4b.1 apoa4b.1 apoc2 apoc2 apoc4 apoc4 apoa4b.3 apoa4b.3 apobb.1 apobb.1 apobb.2 apobb.2 apoc1 apoc1 apof apof apoa4a apoa4a apoea apoea apoa1b apoa1b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mttpMicrosomal triglyceride transfer protein large subunit; Catalyzes the transport of triglyceride, cholesteryl ester, and phospholipid between phospholipid surfaces. Required for the secretion of plasma lipoproteins that contain apolipoprotein B. (884 aa)
apoa1aProapolipoprotein A-I; Participates in the reverse transport of cholesterol from tissues to the liver for excretion by promoting cholesterol efflux from tissues and by acting as a cofactor for the lecithin cholesterol acyltransferase (LCAT). (262 aa)
cetpCholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family. (493 aa)
apoebApolipoprotein Eb; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. Belongs to the apolipoprotein A1/A4/E family. (281 aa)
apobaApolipoprotein Ba. (4418 aa)
apoa4b.1Apolipoprotein A-IV b, tandem duplicate 1. (255 aa)
apoc2Apolipoprotein C-II. (100 aa)
apoc4Hypothetical LOC570390. (102 aa)
apoa4b.3Apolipoprotein A-IV b, tandem duplicate 2. (255 aa)
apobb.1Apolipoprotein Bb, tandem duplicate 1. (3730 aa)
apobb.2Apolipoprotein Bb, tandem duplicate 2. (2534 aa)
apoc1Apolipoprotein C-I. (85 aa)
apofApolipoprotein F. (392 aa)
apoa4aApolipoprotein A-IV a. (258 aa)
apoeaApolipoprotein Ea. (269 aa)
apoa1bApolipoprotein A-Ib. (257 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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