STRINGSTRING
hnrnpua hnrnpua mydgf mydgf csrp2 csrp2 syncripl syncripl cxcl18a.1 cxcl18a.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hnrnpuaHeterogeneous nuclear ribonucleoprotein Ua. (760 aa)
mydgfMyeloid-derived growth factor. (164 aa)
csrp2Cysteine and glycine-rich protein 2. (193 aa)
syncriplSynaptotagmin-binding, cytoplasmic RNA-interacting protein,-like. (560 aa)
cxcl18a.1Chemokine (C-X-C motif) ligand 18a, duplicate 1. (120 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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