STRINGSTRING
pde6a pde6a gngt1 gngt1 gnat2 gnat2 gnat1 gnat1 gnb1a gnb1a rgs9b rgs9b pde6b pde6b gnb1b gnb1b pde6gb pde6gb pde6ga pde6ga rgs9a rgs9a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pde6aPhosphodiesterase. (858 aa)
gngt1Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (73 aa)
gnat2Guanine nucleotide-binding protein (G protein), alpha transducing activity polypeptide 2. (354 aa)
gnat1Guanine nucleotide-binding protein (G protein), alpha transducing activity polypeptide 1. (350 aa)
gnb1aGuanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction (By similarity). (340 aa)
rgs9bRegulator of G protein-signaling 9b. (661 aa)
pde6bPhosphodiesterase. (854 aa)
gnb1bGuanine nucleotide binding protein (G protein), beta polypeptide 1, like. (340 aa)
pde6gbPhosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b. (87 aa)
pde6gaPhosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a. (86 aa)
rgs9aRegulator of G protein-signaling 9a. (480 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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