STRINGSTRING
rb1cc1 rb1cc1 atg16l2 atg16l2 tecpr1a tecpr1a zgc:123244 zgc:123244 gabarapb gabarapb tex264a tex264a zgc:92606 zgc:92606 map1lc3a map1lc3a gabarapl2 gabarapl2 tm9sf1 tm9sf1 rab7b rab7b rab7a rab7a uvrag uvrag JMY JMY sting1 sting1 wdfy3 wdfy3 lamp1a lamp1a map1lc3c map1lc3c whamm whamm map1lc3b map1lc3b gabarapa gabarapa atg16l1 atg16l1 wdr81 wdr81 tecpr1b tecpr1b snap29 snap29 stx17 stx17 rubcnl rubcnl atp6ap2 atp6ap2 E7F6V6_DANRE E7F6V6_DANRE atg16l2-2 atg16l2-2 lamp2 lamp2 zgc:100918 zgc:100918 map1lc3cl map1lc3cl
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rb1cc1RB1-inducible coiled-coil 1. (1622 aa)
atg16l2ATG16 autophagy-related 16-like 2 (S. cerevisiae). (302 aa)
tecpr1aTectonin beta-propeller repeat-containing 1a. (409 aa)
zgc:123244Modulator of macroautophagy TMEM150B; Modulator of macroautophagy that causes accumulation of autophagosomes under basal conditions and enhances autophagic flux (By similarity). Represses cell death and promotes long-term clonogenic survival of cells grown in the absence of glucose in a macroautophagy- independent manner (By similarity). May have some role in extracellular matrix engulfment or growth factor receptor recycling, both of which can modulate cell survival (By similarity). Belongs to the DRAM/TMEM150 family. (232 aa)
gabarapbGABA(A) receptor-associated protein b. (152 aa)
tex264aTestis-expressed 264, ER-phagy receptor a. (321 aa)
zgc:92606Zgc:92606. (117 aa)
map1lc3aMicrotubule-associated protein 1 light chain 3 alpha. (121 aa)
gabarapl2GABA(A) receptor-associated protein-like 2. (117 aa)
tm9sf1Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (609 aa)
rab7bRAB7b, member RAS oncogene family. (204 aa)
rab7aRAB7a, member RAS oncogene family. (207 aa)
uvragUV radiation resistance-associated gene. (664 aa)
JMYJunction mediating and regulatory protein, p53 cofactor. (711 aa)
sting1Stimulator of interferon genes protein; Facilitator of innate immune signaling that acts as a sensor of cytosolic DNA from bacteria and viruses and promotes the production of type I interferon (IFN-alpha and IFN-beta). Innate immune response is triggered in response to non-CpG double-stranded DNA from viruses and bacteria delivered to the cytoplasm. Acts by binding cyclic dinucleotides: recognizes and binds cyclic di- GMP (c-di-GMP), a second messenger produced by bacteria, and cyclic GMP-AMP (cGAMP), a messenger produced by CGAS in response to DNA virus in the cytosol (By similarity). [...] (398 aa)
wdfy3WD repeat and FYVE domain-containing 3. (3522 aa)
lamp1aLysosomal-associated membrane protein 1a. (361 aa)
map1lc3cMicrotubule-associated protein 1 light chain 3 gamma. (128 aa)
whammUncharacterized protein. (621 aa)
map1lc3bMicrotubule-associated protein 1 light chain 3 beta. (122 aa)
gabarapaGABA(A) receptor-associated protein a. (122 aa)
atg16l1ATG16 autophagy-related 16-like 1 (S. cerevisiae). (621 aa)
wdr81WD repeat-containing protein 81; Functions as a negative regulator of the PI3 kinase/PI3K activity associated with endosomal membranes. By modifying the phosphatidylinositol 3-phosphate/PtdInsP3 content of endosomal membranes may regulate endosome fusion, recycling, sorting and early to late endosome transport. May also play a role in aggrephagy, the macroautophagic degradation of ubiquitinated protein aggregates. May also be involved in maintenance of normal mitochondrial structure and organization; Belongs to the WD repeat WDR81 family. (2065 aa)
tecpr1bTectonin beta-propeller repeat-containing 1b. (1105 aa)
snap29Synaptosome-associated protein 29. (232 aa)
stx17Syntaxin 17. (292 aa)
rubcnlRubicon-like autophagy enhancer. (282 aa)
atp6ap2ATPase H+-transporting accessory protein 2. (386 aa)
E7F6V6_DANRESi:dkeyp-27c8.2. (160 aa)
atg16l2-2ATG16 autophagy-related 16-like 2 (S. cerevisiae). (192 aa)
lamp2Lysosomal-associated membrane protein 2. (355 aa)
zgc:100918Zgc:100918. (208 aa)
map1lc3clMicrotubule-associated protein 1 light chain 3 gamma,-like. (126 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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