STRINGSTRING
ier3ip1 ier3ip1 tnfrsf1b tnfrsf1b LOC100537455 LOC100537455 rgcc rgcc creb3l2 creb3l2 RIC1 RIC1 tnfrsf1a tnfrsf1a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ier3ip1Immediate early response 3-interacting protein 1; May be involved in protein transport between endoplasmic reticulum and Golgi apparatus; Belongs to the YOS1 family. (82 aa)
tnfrsf1bTumor necrosis factor receptor superfamily, member 1B. (425 aa)
LOC100537455Uncharacterized protein. (175 aa)
rgccRegulator of cell cycle. (128 aa)
creb3l2Processed cyclic AMP-responsive element-binding protein 3-like protein 2; Transcription factor involved in unfolded protein response (UPR). In the absence of endoplasmic reticulum (ER) stress, inserted into ER membranes, with N-terminal DNA-binding and transcription activation domains oriented toward the cytosolic face of the membrane. In response to ER stress, transported to the Golgi, where it is cleaved in a site-specific manner by resident proteases S1P/mbtps1 and S2P/mbtps2. The released N-terminal cytosolic domain is translocated to the nucleus to effect transcription of specific [...] (519 aa)
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1321 aa)
tnfrsf1aTumor necrosis factor receptor superfamily, member 1a. (389 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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