STRINGSTRING
tmod4 tmod4 lmod2b lmod2b tnnt2d tnnt2d tnnt3b tnnt3b tnnt2a tnnt2a tnnt2b tnnt2b tnnt2e tnnt2e tmod1 tmod1 lmod1b lmod1b tmod2 tmod2 smtnl smtnl tnnt3a tnnt3a tnnt2c tnnt2c tnnt1 tnnt1 smim20 smim20 LOC101887017 LOC101887017 lmod3 lmod3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tmod4Tropomodulin 4 (Muscle). (343 aa)
lmod2bLeiomodin 2 (cardiac) b. (604 aa)
tnnt2dTroponin T2d, cardiac. (241 aa)
tnnt3bTroponin T type 3b (skeletal, fast). (284 aa)
tnnt2aTroponin T type 2a (cardiac). (282 aa)
tnnt2bTroponin T type 2b (cardiac). (233 aa)
tnnt2eNovel slow skeletal troponin T family protein. (285 aa)
tmod1Tropomodulin 1. (356 aa)
lmod1bLeiomodin 1b (smooth muscle). (671 aa)
tmod2Tropomodulin 2. (344 aa)
smtnlSmoothelin,-like. (493 aa)
tnnt3aTroponin T type 3a (skeletal, fast). (230 aa)
tnnt2cTroponin T1, skeletal, slow. (290 aa)
tnnt1Troponin T type 1 (skeletal, slow). (342 aa)
smim20Small integral membrane protein 20. (68 aa)
LOC101887017Leiomodin 1a (smooth muscle). (645 aa)
lmod3Leiomodin-3; Essential for the organization of sarcomeric thin filaments in skeletal muscle; Belongs to the tropomodulin family. (670 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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