Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC108190739 | lmod3 | ENSDARP00000130804 | ENSDARP00000085297 | Myozenin-2-like. | Leiomodin-3; Essential for the organization of sarcomeric thin filaments in skeletal muscle; Belongs to the tropomodulin family. | 0.464 |
| LOC108190739 | myl1 | ENSDARP00000130804 | ENSDARP00000004932 | Myozenin-2-like. | Myosin, light chain 1, alkali; skeletal, fast; Non-regulatory myosin light chain required for proper formation and/or maintenance of myofibers, and thus appropriate muscle function. | 0.428 |
| ankrd1a | asb2a.1 | ENSDARP00000098001 | ENSDARP00000117664 | Ankyrin repeat domain 1a (cardiac muscle). | Ankyrin repeat and SOCS box-containing 2a, tandem duplicate 1. | 0.416 |
| ankrd1a | asb2a.2 | ENSDARP00000098001 | ENSDARP00000127227 | Ankyrin repeat domain 1a (cardiac muscle). | Ankyrin repeat and SOCS box-containing 2a, tandem duplicate 1. | 0.417 |
| ankrd1a | smyd1b | ENSDARP00000098001 | ENSDARP00000130524 | Ankyrin repeat domain 1a (cardiac muscle). | SET and MYND domain-containing 1b. | 0.431 |
| ankrd33ab | asb2a.2 | ENSDARP00000020482 | ENSDARP00000127227 | Ankyrin repeat domain 33Ab. | Ankyrin repeat and SOCS box-containing 2a, tandem duplicate 1. | 0.414 |
| asb2a.1 | ankrd1a | ENSDARP00000117664 | ENSDARP00000098001 | Ankyrin repeat and SOCS box-containing 2a, tandem duplicate 1. | Ankyrin repeat domain 1a (cardiac muscle). | 0.416 |
| asb2a.2 | ankrd1a | ENSDARP00000127227 | ENSDARP00000098001 | Ankyrin repeat and SOCS box-containing 2a, tandem duplicate 1. | Ankyrin repeat domain 1a (cardiac muscle). | 0.417 |
| asb2a.2 | ankrd33ab | ENSDARP00000127227 | ENSDARP00000020482 | Ankyrin repeat and SOCS box-containing 2a, tandem duplicate 1. | Ankyrin repeat domain 33Ab. | 0.414 |
| bves | popdc3 | ENSDARP00000075860 | ENSDARP00000075872 | Blood vessel epicardial substance; Cell adhesion molecule involved in the establishment and/or maintenance of cell integrity. Involved in skeletal muscle and heart development as well as in the maintenance of heart function. May play a role in vamp3-mediated vesicular transport and recycling of receptor molecules. Involved in the formation and regulation of the tight junction (TJ) paracellular permeability barrier in epithelial cells. May induce primordial adhesive contact and aggregation of epithelial cells in a Ca(2+)- independent manner. May be involved in epithelial movement during [...] | Popeye domain-containing 3. | 0.431 |
| bves | stac3 | ENSDARP00000075860 | ENSDARP00000133228 | Blood vessel epicardial substance; Cell adhesion molecule involved in the establishment and/or maintenance of cell integrity. Involved in skeletal muscle and heart development as well as in the maintenance of heart function. May play a role in vamp3-mediated vesicular transport and recycling of receptor molecules. Involved in the formation and regulation of the tight junction (TJ) paracellular permeability barrier in epithelial cells. May induce primordial adhesive contact and aggregation of epithelial cells in a Ca(2+)- independent manner. May be involved in epithelial movement during [...] | SH3 and cysteine-rich domain-containing protein 3; Required for normal excitation-contraction coupling in skeletal muscle and for normal muscle contraction in response to membrane depolarization. Required for normal Ca(2+) release from the sarcplasmic reticulum, which ultimately leads to muscle contraction. Probably functions via its effects on muscle calcium channels. Increases CACNA1S channel activity, in addition to its role in enhancing the expression of CACNA1S at the cell membrane. Has a redundant role in promoting the expression of the calcium channel CACNA1S at the cell membran [...] | 0.491 |
| chrna1 | myf6 | ENSDARP00000021860 | ENSDARP00000040265 | Acetylcholine receptor subunit alpha; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. | Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). | 0.562 |
| chrna1 | myog | ENSDARP00000021860 | ENSDARP00000010347 | Acetylcholine receptor subunit alpha; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. | Myogenin. | 0.667 |
| disp1 | shha | ENSDARP00000065230 | ENSDARP00000125090 | Protein dispatched homolog 1; Functions in hedgehog (Hh) signaling. Regulates the release and extracellular accumulation of cholesterol-modified hedgehog proteins and is hence required for effective production of the Hh signal. Synergizes with SCUBE2 to cause an increase in SHH secretion (By similarity); Belongs to the dispatched family. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.891 |
| disp1 | smo | ENSDARP00000065230 | ENSDARP00000013486 | Protein dispatched homolog 1; Functions in hedgehog (Hh) signaling. Regulates the release and extracellular accumulation of cholesterol-modified hedgehog proteins and is hence required for effective production of the Hh signal. Synergizes with SCUBE2 to cause an increase in SHH secretion (By similarity); Belongs to the dispatched family. | Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.705 |
| ep300a | klf5a | ENSDARP00000140048 | ENSDARP00000012722 | E1A-binding protein p300 a. | Progesterone immunomodulatory-binding factor 1. | 0.428 |
| ep300a | klf5b | ENSDARP00000140048 | ENSDARP00000122207 | E1A-binding protein p300 a. | Kruppel-like factor 5b. | 0.428 |
| ep300a | klf5l | ENSDARP00000140048 | ENSDARP00000125727 | E1A-binding protein p300 a. | Kruppel-like factor 5 like. | 0.428 |
| ep300a | mef2d | ENSDARP00000140048 | ENSDARP00000115546 | E1A-binding protein p300 a. | Myocyte enhancer factor 2d. | 0.505 |
| ep300a | myf5 | ENSDARP00000140048 | ENSDARP00000109289 | E1A-binding protein p300 a. | Myogenic factor. | 0.604 |
page 1 of 10