STRINGSTRING
ENSDARP00000151202 ENSDARP00000151202 spint1a spint1a LOC101886910 LOC101886910 zdhhc21 zdhhc21 pacsin1a pacsin1a kdf1a kdf1a tomt tomt grxcr1a grxcr1a svep1 svep1 kcnq1.2 kcnq1.2 Zgc:171929 Zgc:171929 nsdhl nsdhl clrn1 clrn1 pdzd7a pdzd7a slitrk6 slitrk6 kdf1b kdf1b slc44a4 slc44a4 foxq1a foxq1a tprn tprn zgc:92162 zgc:92162 mib1 mib1 fgf3 fgf3 znf750 znf750 evplb evplb ppl ppl wdpcp wdpcp nf1a nf1a sharpin sharpin si:dkey-7i4.24 si:dkey-7i4.24 zgc:123278 zgc:123278 grhl2a grhl2a ENSDARP00000125042 ENSDARP00000125042 grhl2b grhl2b ovol1a ovol1a grhl1 grhl1 tgfb2 tgfb2 tmem79a tmem79a grxcr1b grxcr1b sostdc1b sostdc1b ponzr5 ponzr5 ponzr3 ponzr3 ponzr2 ponzr2 wnt16 wnt16 fgf7 fgf7 nom1 nom1 kaznb kaznb kazna kazna nf1b nf1b whrnb whrnb ppp1r18 ppp1r18 cnfn cnfn tp53 tp53 ponzr4 ponzr4 ptprq ptprq pax5 pax5 lats2 lats2 ercc2 ercc2 foxq1b foxq1b ovol1b ovol1b myo6a myo6a ngfra ngfra krt5 krt5 tmem132e tmem132e insm1a insm1a fa2h fa2h foxj1b foxj1b ush1c ush1c whrna whrna tmem79b tmem79b tgfb5 tgfb5 dlx4b dlx4b zgc:158846 zgc:158846 eda eda atp6v0d1 atp6v0d1 sostdc1a sostdc1a ush2a ush2a kcnq1.1 kcnq1.1 zmpste24 zmpste24 krt8 krt8 cops5 cops5 pax2a pax2a scel scel opn3 opn3 dkk1b dkk1b myo6b myo6b fosl2 fosl2 gsdmeb gsdmeb igfbp5a igfbp5a pacsin1b pacsin1b her15.1 her15.1 her15.2 her15.2 s1pr2 s1pr2 txnipa txnipa ugcg ugcg pax2b pax2b dctn2 dctn2 asah1b asah1b tsg101a tsg101a llgl2 llgl2 pax8 pax8 ift74 ift74 lats1 lats1 neurod1 neurod1 ptch1 ptch1 sav1 sav1 dlx3b dlx3b evpla evpla cobl cobl dkk1a dkk1a krt4 krt4 tsg101b tsg101b smo smo trpc4apa trpc4apa ybx1 ybx1 jag1b jag1b asah1a asah1a spint1b spint1b foxn1 foxn1 cdh2 cdh2 strc1 strc1 cst14b.2 cst14b.2 znrf3 znrf3
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSDARP00000151202Peptidase_M48_N domain-containing protein. (272 aa)
spint1aSerine peptidase inhibitor, Kunitz type 1 a. (523 aa)
LOC101886910Cystatin domain-containing protein. (126 aa)
zdhhc21Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (141 aa)
pacsin1aProtein kinase C and casein kinase substrate in neurons 1a. (438 aa)
kdf1aKeratinocyte differentiation factor 1a. (383 aa)
tomtTransmembrane O-methyltransferase homolog; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones (By similarity). Required for auditory function. Component of the hair cell's mechanotransduction (MET) machinery. Involved in the assembly of the asymmetric tip-link MET complex. Required for transportation of TMC1 and TMC2 proteins into the mechanically sensitive stereocilia of the hair cells. The function in MET is independent of the enzymatic activity. (259 aa)
grxcr1aGlutaredoxin and cysteine-rich domain-containing 1 a. (295 aa)
svep1Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing 1. (3615 aa)
kcnq1.2Potassium voltage-gated channel, KQT-like subfamily, member 1.2; Belongs to the potassium channel family. (531 aa)
Zgc:171929Zgc:171929. (109 aa)
nsdhlNAD(P)-dependent steroid dehydrogenase-like; Belongs to the 3-beta-HSD family. (345 aa)
clrn1Clrn1 protein. (232 aa)
pdzd7aPDZ domain-containing 7a. (954 aa)
slitrk6SLIT and NTRK-like family, member 6. (830 aa)
kdf1bKeratinocyte differentiation factor 1b. (334 aa)
slc44a4Choline transporter-like protein 4; Choline transporter that seems to play a role in the choline- acetylcholine system and is required to the efferent innervation of hair cells in the olivocochlear bundle for the maintenance of physiological function of outer hair cells and the protection of hair cells from acoustic injury; Belongs to the CTL (choline transporter-like) family. (703 aa)
foxq1aForkhead box Q1a. (312 aa)
tprnTaperin. (758 aa)
zgc:92162Phospholipase A(2). (153 aa)
mib1E3 ubiquitin-protein ligase mib1; E3 ubiquitin-protein ligase that mediates ubiquitination of Delta receptors, which act as ligands of Notch proteins. Positively regulates the Delta-mediated Notch signaling by ubiquitinating the intracellular domain of Delta, leading to endocytosis of Delta receptors. It thereby participates in many processes regulated by the Notch signaling pathway, such as midline cell fate specification prior to germ layer formation, patterning of sensory cell differentiation in the ear, neurogenesis of the hindbrain and commitment to a secretory fate in the intesti [...] (1041 aa)
fgf3Fibroblast growth factor 3; Plays an important role in the regulation of embryonic development, cell proliferation, and cell differentiation. Belongs to the heparin-binding growth factors family. (256 aa)
znf750Zinc finger protein 750; Transcription factor involved in epidermis differentiation. (607 aa)
evplbEnvoplakin b. (1668 aa)
pplPeriplakin. (1754 aa)
wdpcpWD repeat-containing planar cell polarity effector. (707 aa)
nf1aNeurofibromin 1a. (2759 aa)
sharpinSHANK-associated RH domain-interacting protein. (394 aa)
si:dkey-7i4.24Si:dkey-7i4.24. (412 aa)
zgc:123278Zgc:123278. (185 aa)
grhl2aGrainyhead-like transcription factor 2a. (593 aa)
ENSDARP00000125042Patched 1. (120 aa)
grhl2bGrainyhead-like transcription factor 2b. (601 aa)
ovol1aOvo-like zinc finger 1a. (319 aa)
grhl1Grainyhead-like transcription factor 1. (613 aa)
tgfb2Transforming growth factor, beta 2. (413 aa)
tmem79aTransmembrane protein 79a. (337 aa)
grxcr1bGlutaredoxin and cysteine-rich domain-containing 1 b. (148 aa)
sostdc1bSclerostin domain-containing 1b. (204 aa)
ponzr5Plac8 onzin-related protein 5. (123 aa)
ponzr3Plac8 onzin-related protein 3. (126 aa)
ponzr2Plac8 onzin-related protein 2. (129 aa)
wnt16Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (356 aa)
fgf7Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (180 aa)
nom1Nucleolar protein with MIF4G domain 1. (835 aa)
kaznbKazrin, periplakin-interacting protein b. (430 aa)
kaznaKazrin-A; Belongs to the kazrin family. (786 aa)
nf1bNeurofibromin 1b. (2759 aa)
whrnbWhirlin b. (946 aa)
ppp1r18Protein phosphatase 1, regulatory subunit 18. (1319 aa)
cnfnCornifelin homolog; Belongs to the cornifelin family. (112 aa)
tp53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of bax and fas antigen expression, or by repression of Bcl-2 expression. (369 aa)
ponzr4Plac8 onzin-related protein 4. (126 aa)
ptprqProtein tyrosine phosphatase receptor type Q. (2301 aa)
pax5Paired box 5. (396 aa)
lats2Large tumor suppressor kinase 2. (1140 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
foxq1bForkhead box Q1b. (304 aa)
ovol1bOvo-like zinc finger 1b. (285 aa)
myo6aMyosin VIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1288 aa)
ngfraNerve growth factor receptor a (TNFR superfamily, member 16). (346 aa)
krt5Keratin 5; Belongs to the intermediate filament family. (566 aa)
tmem132eTransmembrane protein 132E; Required for normal inner ear hair cell function and hearing. (1073 aa)
insm1aInsulinoma-associated protein 1a; May act as a transcriptional regulator. May play a role in neurogenesis and neuroendocrine cell differentiation during embryonic development (By similarity). (383 aa)
fa2hFatty acid 2-hydroxylase; Catalyzes stereospecific hydroxylation of free fatty acids at the C-2 position to produce (R)-2-hydroxy fatty acids, which are building blocks of sphingolipids and glycosphingolipids common in neural tissue and epidermis. Plays an essential role in the synthesis of galactosphingolipids of the myelin sheath. Responsible for the synthesis of sphingolipids and glycosphingolipids involved in the formation of epidermal lamellar bodies critical for skin permeability barrier. Participates in the synthesis of glycosphingolipids and a fraction of type II wax diesters i [...] (377 aa)
foxj1bForkhead box protein J1-B; Key transcription factor required for motile ciliogenesis. Activates genes essential for motile cilia formation and function. Belongs to the FOXJ1 family. (442 aa)
ush1cUsher syndrome 1C (Autosomal recessive, severe). (548 aa)
whrnaWhirlin a. (939 aa)
tmem79bTransmembrane protein 79b. (406 aa)
tgfb5Transforming growth factor beta; Belongs to the TGF-beta family. (414 aa)
dlx4bHomeobox protein Dlx4b; During larvae development, may be important for neurocranium morphogenesis. (254 aa)
zgc:158846Zgc:158846; Belongs to the intermediate filament family. (486 aa)
edaEctodysplasin A; Belongs to the tumor necrosis factor family. (359 aa)
atp6v0d1V-type proton ATPase subunit d 1; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. May play a role in coupling of proton transport and ATP hydrolysis. May play a role in cilium biogenesis through regulation of the transport and the localization of proteins to the cilium. In aerobic conditions, involved in intracellular iron homeostasis, thus triggering the activity of Fe(2+) p [...] (350 aa)
sostdc1aSclerostin domain-containing 1a. (196 aa)
ush2aUsher syndrome 2A (autosomal recessive, mild). (5236 aa)
kcnq1.1Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family. (655 aa)
zmpste24CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (468 aa)
krt8Keratin, type II cytoskeletal 8; Together with KRT19, helps to link the contractile apparatus to dystrophin at the costameres of striated muscle. (520 aa)
cops5COP9 signalosome complex subunit 5; Probable protease subunit of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of E3 ligase complexes, leading to modify the Ubl ligase activity. In the complex, it probably acts as the catalytic center that mediates the cleavage of nedd8 from cullins. It however has no metalloprotease activity by itself and requires the other subunits of the CSN complex; Belon [...] (334 aa)
pax2aPaired box protein Pax-2a; Probable transcription factor involved in the development of the midbrain/hindbrain boundary (MHB) organizer and specification of neuronal cell fates. Required for establishment of eng2 and eng3 gene expression in the midbrain and MHB primordium during late gastrulation. (391 aa)
scelSciellin. (612 aa)
opn3Teleost encephalopsin/panopsin. (387 aa)
dkk1bDickkopf WNT-signaling pathway inhibitor 1b. (241 aa)
myo6bMyosin VIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1267 aa)
fosl2FOS-like 2, AP-1 transcription factor subunit. (341 aa)
gsdmebDeafness, autosomal dominant 5. (472 aa)
igfbp5aInsulin-like growth factor-binding protein 5a. (268 aa)
pacsin1bProtein kinase C and casein kinase substrate in neurons protein 1; Binds to membranes via its F-BAR domain and mediates membrane tubulation. Plays a role in cellular transport processes by recruiting dynamins to membranes. Plays a role in the reorganization of the actin cytoskeleton and in neuron morphogenesis via its interaction with cobl, and by recruiting cobl to the cell cortex. Plays a role in the regulation of neurite formation, neurite branching and the regulation of neurite length. Required for normal synaptic vesicle endocytosis; this process retrieves previously released neur [...] (445 aa)
her15.1Hairy and enhancer of split-related 15, tandem duplicate 1. (149 aa)
her15.2Zgc:136520 protein. (149 aa)
s1pr2Sphingosine 1-phosphate receptor 2; Receptor for the lysosphingolipid sphingosine 1-phosphate (S1P). S1P receptor is critical for cell migration and epithelial integrity during vertebrate embryogenesis. Receptor for the chemokine-like protein FAM19A5 (By similarity). Mediates the inhibitory effect of FAM19A5 on vascular smooth muscle cell proliferation and migration (By similarity). (370 aa)
txnipaThioredoxin-interacting protein a. (400 aa)
ugcgUDP-glucose ceramide glucosyltransferase. (438 aa)
pax2bPaired box 2b. (386 aa)
dctn2Dynactin subunit 2; Modulates cytoplasmic dynein binding to an organelle, and plays a role in prometaphase chromosome alignment and spindle organization during mitosis. Involved in anchoring microtubules to centrosomes. May play a role in synapse formation during brain development (By similarity). (405 aa)
asah1bN-acylsphingosine amidohydrolase (acid ceramidase) 1b; Belongs to the acid ceramidase family. (395 aa)
tsg101aTumor susceptibility 101a. (390 aa)
llgl2LLGL scribble cell polarity complex component 2; Essential for hemidesmosome formation and maintenance of the cytoskeleton elements as well as cellular morphology in the basal epidermis during development. Also involved in regulating growth of the basal epidermis; Belongs to the WD repeat L(2)GL family. (1020 aa)
pax8Paired box 8. (448 aa)
ift74Intraflagellar transport 74. (583 aa)
lats1LATS, large tumor suppressor, homolog 1 (Drosophila). (1068 aa)
neurod1Neurogenic differentiation factor 1; May act as a transcriptional activator. Differentiation factor required for neurogenesis. Acts as an upstream activator of isl1. (350 aa)
ptch1Protein patched homolog 1. (1475 aa)
sav1Salvador family WW domain-containing protein 1. (397 aa)
dlx3bHomeobox protein Dlx3b; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. (269 aa)
evplaEnvoplakin a. (1975 aa)
coblProtein cordon-bleu; Plays an important role in the reorganization of the actin cytoskeleton. Binds to and sequesters actin monomers (G actin). Nucleates actin polymerization by assembling three actin monomers in cross-filament orientation and thereby promotes growth of actin filaments at the barbed end. Can also mediate actin depolymerization at barbed ends and severing of actin filaments. Promotes formation of cell ruffles. Regulates neuron morphogenesis and increases branching of axons and dendrites (By similarity). Required for normal embryonic development, including normal develop [...] (1327 aa)
dkk1aDickkopf WNT-signaling pathway inhibitor 1a. (256 aa)
krt4Keratin 4; Belongs to the intermediate filament family. (497 aa)
tsg101bTumor susceptibility 101b. (393 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (822 aa)
trpc4apaTransient receptor potential cation channel, subfamily C, member 4-associated protein a. (774 aa)
ybx1Y-box-binding protein 1; DNA- and RNA-binding protein involved in various processes, such as translational repression, RNA stabilization, mRNA splicing and transcription regulation. Binds preferentially to the 5'-[CU]CUGCG-3' RNA motif and specifically recognizes mRNA transcripts modified by C5-methylcytosine (m5C). Promotes mRNA stabilization: acts by binding to m5C- containing mRNAs and recruiting pabpc1a, thereby preventing mRNA decay. Plays a role in the maternal-to-zygotic transition in early embryo by binding to m5C-containing maternal mRNAs and preventing their degradation. Also [...] (309 aa)
jag1bProtein jagged-1b; Ligand for Notch receptors and involved in the mediation of Notch signaling (By similarity). Seems to be involved in cell-fate decisions. (1213 aa)
asah1aN-acylsphingosine amidohydrolase (acid ceramidase) 1a; Belongs to the acid ceramidase family. (390 aa)
spint1bSerine peptidase inhibitor, Kunitz type 1 b. (499 aa)
foxn1Forkhead box N1. (565 aa)
cdh2Cadherin-2; Calcium-dependent cell adhesion protein; preferentially mediates homotypic cell-cell adhesion (By similarity). Cadherins contribute to the sorting of heterogeneous cell types, and thereby play an important role during embryonic development. Required for normal neural tube morphogenesis. Required to allow mid- and hindbrain neurons to reach and maintain their appropriate positions within the neural tube by restricting neuronal motility within the embryonic mid- and hindbrain. (893 aa)
strc1Stereocilin 1. (2032 aa)
cst14b.2Cystatin 14b, tandem duplicate 2. (103 aa)
znrf3E3 ubiquitin-protein ligase znrf3; E3 ubiquitin-protein ligase that acts as a negative regulator of the Wnt signaling pathway by mediating the ubiquitination and subsequent degradation of Wnt receptor complex components. Along with RSPO2 and RNF43, constitutes a master switch that governs limb specification (By similarity). Belongs to the ZNRF3 family. (866 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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