STRINGSTRING
cntln cntln cep135 cep135 cep68 cep68 rttn rttn crocc2 crocc2 F1R371_DANRE F1R371_DANRE dctn1b dctn1b kif3a kif3a nin nin sgo1 sgo1 dctn1a dctn1a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cntlnCentlein, centrosomal protein. (1120 aa)
cep135Centrosomal protein of 135 kDa; Centrosomal protein involved in centriole biogenesis. Acts as a scaffolding protein during early centriole biogenesis. Required for the targeting of centriole satellite proteins to centrosomes. Also required for centriole-centriole cohesion during interphase by acting as a platform protein for cep250 at the centriole (By similarity). Belongs to the CEP135/TSGA10 family. (1164 aa)
cep68Centrosomal protein 68. (650 aa)
rttnRotatin. (2271 aa)
crocc2Ciliary rootlet coiled-coil, rootletin family member 2. (1959 aa)
F1R371_DANRESi:dkey-230p4.1. (2775 aa)
dctn1bDynactin 1b. (1258 aa)
kif3aKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (701 aa)
ninNinein (GSK3B-interacting protein). (1954 aa)
sgo1Shugoshin 1. (616 aa)
dctn1aDynactin 1a. (1257 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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