Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DYNLT1 | dynlt1 | ENSDARP00000112950 | ENSDARP00000067481 | Si:dkey-148f10.4. | Dynein, light chain, Tctex-type 1. | 0.546 |
| ENSDARP00000151788 | sema6a | ENSDARP00000151788 | ENSDARP00000133240 | Sema domain-containing protein; Belongs to the semaphorin family. | Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A. | 0.899 |
| brinp1 | sema6d | ENSDARP00000100708 | ENSDARP00000121171 | Bone morphogenetic protein/retinoic acid-inducible neural-specific 1. | Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D; Belongs to the semaphorin family. | 0.432 |
| cdk5 | sema3ab | ENSDARP00000073666 | ENSDARP00000061885 | Cyclin-dependent protein kinase 5; Belongs to the protein kinase superfamily. | Semaphorin-3ab; Might normally influence the midsegmental pathway choice of the ventrally extending motor axons by contributing to a repulsive domain in the posterior somite. | 0.583 |
| dip2ca | sema3fa | ENSDARP00000119049 | ENSDARP00000046497 | Disco-interacting protein 2 homolog Ca. | Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. | 0.407 |
| dynlt1 | DYNLT1 | ENSDARP00000067481 | ENSDARP00000112950 | Dynein, light chain, Tctex-type 1. | Si:dkey-148f10.4. | 0.546 |
| ednrba | ednrbb | ENSDARP00000111210 | ENSDARP00000124220 | Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family. | Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family. | 0.904 |
| ednrba | f2 | ENSDARP00000111210 | ENSDARP00000052324 | Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family. | Coagulation factor II (thrombin); Belongs to the peptidase S1 family. | 0.532 |
| ednrbb | ednrba | ENSDARP00000124220 | ENSDARP00000111210 | Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family. | Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family. | 0.904 |
| epcam | igf2a | ENSDARP00000059320 | ENSDARP00000016954 | Epithelial cell adhesion molecule. | Insulin-like growth factor 2a. | 0.464 |
| epha4a | notch1a | ENSDARP00000123962 | ENSDARP00000137942 | Ephrin type-A receptor 4a; Receptor tyrosine kinase which binds membrane-bound ephrin family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Highly promiscuous, it has the unique property among Eph receptors to bind and to be physiologically activated by both GPI- anchored ephrin-A and transmembrane ephrin-B ligands including efna1 and efnb3. [...] | Neurogenic locus notch homolog protein 1; Functions as a receptor for membrane-bound ligands Jagged-1 (JAG1), Jagged-2 (JAG2) and Delta-1 (DLL1) to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. Involved in angiogenesis; negatively regulates endothelial cell proliferation and migration and angiogenic sprouting. Involved in the [...] | 0.400 |
| epha4a | sema3b | ENSDARP00000123962 | ENSDARP00000015477 | Ephrin type-A receptor 4a; Receptor tyrosine kinase which binds membrane-bound ephrin family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Highly promiscuous, it has the unique property among Eph receptors to bind and to be physiologically activated by both GPI- anchored ephrin-A and transmembrane ephrin-B ligands including efna1 and efnb3. [...] | Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family. | 0.400 |
| f2 | ednrba | ENSDARP00000052324 | ENSDARP00000111210 | Coagulation factor II (thrombin); Belongs to the peptidase S1 family. | Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family. | 0.532 |
| her15.1 | neurog1 | ENSDARP00000055706 | ENSDARP00000073024 | Hairy and enhancer of split-related 15, tandem duplicate 1. | Neurogenin-1; Transcriptional regulator. Activates transcription by binding to the E box-containing promoter (By similarity). Mediates neuronal differentiation. Required for the development of Rohon-Beard spinal sensory neurons and dorsal root ganglion neurons, but not for primary motoneurons or autonomic neurons. Required for development of all cranial ganglia but not associated glial cells. Regulates epiphysial neurogenesis, acting partially redundantly with ascl1a and downstream of flh. Required for the development of basal forebrain dopaminergic neurons; involved in the specificati [...] | 0.672 |
| her15.1 | notch1a | ENSDARP00000055706 | ENSDARP00000137942 | Hairy and enhancer of split-related 15, tandem duplicate 1. | Neurogenic locus notch homolog protein 1; Functions as a receptor for membrane-bound ligands Jagged-1 (JAG1), Jagged-2 (JAG2) and Delta-1 (DLL1) to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. Involved in angiogenesis; negatively regulates endothelial cell proliferation and migration and angiogenic sprouting. Involved in the [...] | 0.903 |
| her15.1 | notch1b | ENSDARP00000055706 | ENSDARP00000050854 | Hairy and enhancer of split-related 15, tandem duplicate 1. | Notch receptor 1b. | 0.601 |
| igf2a | epcam | ENSDARP00000016954 | ENSDARP00000059320 | Insulin-like growth factor 2a. | Epithelial cell adhesion molecule. | 0.464 |
| kifap3a | kifap3b | ENSDARP00000009663 | ENSDARP00000009364 | Kinesin-associated protein 3a. | Kinesin-associated protein 3b. | 0.559 |
| kifap3b | kifap3a | ENSDARP00000009364 | ENSDARP00000009663 | Kinesin-associated protein 3b. | Kinesin-associated protein 3a. | 0.559 |
| neurog1 | her15.1 | ENSDARP00000073024 | ENSDARP00000055706 | Neurogenin-1; Transcriptional regulator. Activates transcription by binding to the E box-containing promoter (By similarity). Mediates neuronal differentiation. Required for the development of Rohon-Beard spinal sensory neurons and dorsal root ganglion neurons, but not for primary motoneurons or autonomic neurons. Required for development of all cranial ganglia but not associated glial cells. Regulates epiphysial neurogenesis, acting partially redundantly with ascl1a and downstream of flh. Required for the development of basal forebrain dopaminergic neurons; involved in the specificati [...] | Hairy and enhancer of split-related 15, tandem duplicate 1. | 0.672 |
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