STRINGSTRING
F1QZN8_DANRE F1QZN8_DANRE Q1L8R8_DANRE Q1L8R8_DANRE ctdp1 ctdp1 E7FFZ5_DANRE E7FFZ5_DANRE lmcd1 lmcd1 errfi1a errfi1a mymk mymk LOC571737 LOC571737 akap6 akap6 parp1 parp1 tnfrsf1a tnfrsf1a gsk3ab gsk3ab gsk3ba gsk3ba igfbp5a igfbp5a eif4ebp3l eif4ebp3l LOC101883528 LOC101883528 gsk3bb gsk3bb pde9a pde9a edn1 edn1 smad4a smad4a gb:cr929477 gb:cr929477 pde9al pde9al tnfrsf1b tnfrsf1b mlip mlip gsk3aa gsk3aa rusc1 rusc1 tomm70a tomm70a parp2 parp2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F1QZN8_DANREPhosphodiesterase. (514 aa)
Q1L8R8_DANREMothers against decapentaplegic homolog. (571 aa)
ctdp1RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (947 aa)
E7FFZ5_DANREMothers against decapentaplegic homolog. (568 aa)
lmcd1LIM and cysteine-rich domains 1. (342 aa)
errfi1aERBB receptor feedback inhibitor 1a. (447 aa)
mymkProtein myomaker; Myoblast-specific protein that mediates myoblast fusion, an essential step for the formation of multi-nucleated muscle fibers. Actively participates in the membrane fusion reaction by mediating the mixing of cell membrane lipids (hemifusion) upstream of mymx (By similarity). Belongs to the TMEM8 family. (220 aa)
LOC571737Phosphodiesterase. (518 aa)
akap6A kinase (PRKA) anchor protein 6. (2174 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1013 aa)
tnfrsf1aTumor necrosis factor receptor superfamily, member 1a. (389 aa)
gsk3abGlycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily. (440 aa)
gsk3baGlycogen synthase kinase 3 beta, genome duplicate a; Belongs to the protein kinase superfamily. (421 aa)
igfbp5aInsulin-like growth factor-binding protein 5a. (268 aa)
eif4ebp3lEukaryotic translation initiation factor 4E-binding protein 3-like; Regulates eif4e1a activity by preventing its assembly into the eIF4F complex; Belongs to the eIF4E-binding protein family. (112 aa)
LOC101883528SCP domain-containing protein; Belongs to the CRISP family. (155 aa)
gsk3bbGlycogen synthase kinase 3 beta, genome duplicate b; Belongs to the protein kinase superfamily. (419 aa)
pde9aPhosphodiesterase. (509 aa)
edn1Endothelin 1. (188 aa)
smad4aMothers against decapentaplegic homolog. (547 aa)
gb:cr929477SMAD family member 4. (332 aa)
pde9alPhosphodiesterase. (519 aa)
tnfrsf1bTumor necrosis factor receptor superfamily, member 1B. (425 aa)
mlipMuscular LMNA-interacting protein. (316 aa)
gsk3aaGlycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily. (462 aa)
rusc1RUN and SH3 domain-containing 1. (610 aa)
tomm70aTranslocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (579 aa)
parp2Poly [ADP-ribose] polymerase. (649 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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