STRINGSTRING
prkci prkci spint1b spint1b phactr1 phactr1 efhc2 efhc2 wnt11f2 wnt11f2 pdx1 pdx1 fgf8a fgf8a mab21l2 mab21l2 mthfd1b mthfd1b dvl2 dvl2 mpp5b mpp5b hand2 hand2 prkacba prkacba vangl2 vangl2 tsc1a tsc1a vax1 vax1 abl2 abl2 grem1a grem1a phactr4b phactr4b pitx2 pitx2 tgfb1a tgfb1a mthfd1l mthfd1l ccdc88c ccdc88c sall4 sall4 pou5f3 pou5f3 ift52 ift52 scrib scrib hectd1 hectd1 ret ret tmed2 tmed2 irx1b irx1b glmna glmna vax2 vax2 prkacbb prkacbb mks1 mks1 kdm6al kdm6al sdc4 sdc4 ccdc85b ccdc85b hs2st1b hs2st1b dvl3a dvl3a ptk7a ptk7a spint2 spint2 vegfc vegfc sfrp2 sfrp2 dlx6a dlx6a dvl1b dvl1b dlx5a dlx5a cecr2 cecr2 fuz fuz prkacab prkacab tctn1 tctn1 wnt6b wnt6b bbs4 bbs4 foxc1a foxc1a LOC100332300 LOC100332300 deaf1 deaf1 setd2 setd2 cthrc1a cthrc1a kdm6a kdm6a cthrc1b cthrc1b gdf7 gdf7 tsc1b tsc1b dvl1a dvl1a mthfr mthfr tgfb1b tgfb1b hoxb1b hoxb1b mpp5a mpp5a F8W5A4_DANRE F8W5A4_DANRE grsf1 grsf1 abl1 abl1 shha shha grem2a grem2a tsc2 tsc2 mib1 mib1 prkacaa prkacaa phactr4a phactr4a irx1a irx1a lrrc1 lrrc1 mab21l1 mab21l1 irx3a irx3a hs2st1a hs2st1a dvl3 dvl3 nkd1 nkd1 phactr4a-2 phactr4a-2 kdf1a kdf1a sfrp2l sfrp2l spint1a spint1a mthfd1a mthfd1a ENSDARP00000153246 ENSDARP00000153246 ENSDARP00000153406 ENSDARP00000153406
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
prkciProtein kinase C iota type; Calcium- and diacylglycerol-independent serine/ threonine- protein kinase that plays a general protective role against apoptotic stimuli, is involved in NF-kappa-B activation, cell survival, differentiation and polarity, and contributes to the regulation of microtubule dynamics in the early secretory pathway (By similarity). Is required for the formation and maintenance of the zonula adherens during early epithelial development and plays a critical role in organ morphogenesis and in regulating the orientation of cell division. (588 aa)
spint1bSerine peptidase inhibitor, Kunitz type 1 b. (499 aa)
phactr1Phosphatase and actin regulator. (542 aa)
efhc2EF-hand domain-containing family member C2. (748 aa)
wnt11f2Protein Wnt-11; Ligand for members of the frizzled family of seven transmembrane receptors. May play a role in the formation of dermal structure, both limb and feather buds. Is likely to signal over only few cell diameters (By similarity); Belongs to the Wnt family. (353 aa)
pdx1Pancreatic and duodenal homeobox 1. (246 aa)
fgf8aFibroblast growth factor 8; Plays an important role in the regulation of embryonic development, cell proliferation, cell differentiation and cell migration (By similarity). Required for Kupffer's vesicle ciliogenesis. (210 aa)
mab21l2Protein mab-21-like 2; Required for eye morphogenesis. May promote the survival of proliferating retinal progenitor cells; Belongs to the mab-21 family. (359 aa)
mthfd1bMethylenetetrahydrofolate dehydrogenase (NADP+-dependent) 1b. (934 aa)
dvl2Dishevelled segment polarity protein 2. (747 aa)
mpp5bMembrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family. (639 aa)
hand2Heart- and neural crest derivatives-expressed protein 2; Essential for myocardial and pectoral fin differentiation, patterning and morphogenesis. (205 aa)
prkacbaProtein kinase, cAMP-dependent, catalytic, beta a; Belongs to the protein kinase superfamily. (395 aa)
vangl2Vang-like protein 2; Plays a role in non-canonical Wnt/planar cell polarity (PCP) signaling to regulate convergent extension cell movements during gastrulation. Acts together with scrib and prickle1 and localizes prickle1 and dvl2/dsh to the plasma membrane. Has an overlapping role with kny during both convergent extension and eye development. In the eye, involved in establishing proper alignment of the anterior neural plate and midline cells expressing shha and shhb/twhh. Has indirect effects on a number of other developmental processes including notochord shape formation, neural prog [...] (526 aa)
tsc1aTSC complex subunit 1a. (1128 aa)
vax1Ventral anterior homeobox 1; Transcription factor that is required for closure of the choroid fissure and together with Vax2 is required for optic nerve differentiation and to limit retinal development to the optic cup. Belongs to the EMX homeobox family. (317 aa)
abl2Tyrosine-protein kinase. (1135 aa)
grem1aGremlin. (177 aa)
phactr4bPhosphatase and actin regulator 4B; Regulator of protein phosphatase 1 (PP1) required for neural tube and optic fissure closure, and enteric neural crest cell (ENCCs) migration during development. Acts as an activator of PP1. During neural tube closure, localizes to the ventral neural tube and activates PP1, leading to down-regulate cell proliferation within cranial neural tissue and the neural retina. Also acts as a regulator of migration of enteric neural crest cells (ENCCs) by activating PP1, leading to repression of the integrin signaling through the rho/rock pathway (By similarity). (754 aa)
pitx2Pituitary homeobox 2; Isoform a and isoform c differentially regulate mesendoderm formation and asymmetric organ development. Both isoforms regulate left-right development, but isoform a has a stronger effect on heart laterality; Belongs to the paired homeobox family. Bicoid subfamily. (314 aa)
tgfb1aTransforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
mthfd1lMethylenetetrahydrofolate dehydrogenase (NADP+-dependent) 1-like. (978 aa)
ccdc88cProtein Daple; Positive regulator of Wnt signaling, acting synergistically with dvl2 (By similarity). Functions upstream of ctnnb1/beta-catenin in the canonical Wnt pathway, and also activates jnk in the Wnt/planar cell polarity (PCP) pathway (By similarity). Acts as a non-receptor guanine nucleotide exchange factor which binds to and activates guanine nucleotide-binding protein G(i) alpha (Gi-alpha) subunits. This promotes apical cell constriction and subsequent bending of the neural plate during neurulation via arhgef18 (By similarity). (1997 aa)
sall4Spalt-like transcription factor 4. (1091 aa)
pou5f3POU domain, class 5, transcription factor 1; Involved in early development of embryos, especially in the process of gastrulation. May play an important role in establishing and specifying rhombomeric segments. Seems to be required to maintain the cells in a highly undifferentiated state. In contrast to POU2, T-POU2 lacks DNA-binding activity because of its incomplete pou domain structure. Overexpression of POU2 does not have any effect on development, whereas overexpression of t-POU2 causes developmental retardation or arrest before gastrulation; Belongs to the POU transcription factor [...] (472 aa)
ift52Intraflagellar transport 52 homolog (Chlamydomonas). (435 aa)
scribProtein scribble homolog; Scaffold protein involved in different aspects of polarized cells differentiation regulating epithelial and neuronal morphogenesis. Regulates the caudal migration of the nVII motor neurons. Required for convergent extension movements during gastrulation. (1724 aa)
hectd1Novel protein with HECT-domain (Ubiquitin-transferase). (2576 aa)
retProto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1106 aa)
tmed2Transmembrane p24-trafficking protein 2. (208 aa)
irx1bIroquois homeobox protein 1, b. (445 aa)
glmnaGlomulin, FKBP-associated protein a. (592 aa)
vax2Ventral anterior homeobox 2; Transcription factor that may function in dorsoventral specification of the forebrain. Required for closure of the choroid fissure and together with vax1 is required for optic nerve differentiation and to limit retinal development to the optic cup. Belongs to the EMX homeobox family. (307 aa)
prkacbbProtein kinase, cAMP-dependent, catalytic, beta b; Belongs to the protein kinase superfamily. (351 aa)
mks1MKS transition zone complex subunit 1. (559 aa)
kdm6alUbiquitously transcribed tetratricopeptide repeat, X chromosome like 1. (1311 aa)
sdc4Syndecan 4. (207 aa)
ccdc85bCoiled-coil domain-containing protein 85B; Functions as a transcriptional repressor. May inhibit the activity of CTNNB1 in a TP53-dependent manner and thus regulate cell growth (By similarity). May function in adipocyte differentiation, negatively regulating mitotic clonal expansion (By similarity). Plays a role in cell-cell adhesion and epithelium development through its interaction with proteins of the beta-catenin family (Probable). (200 aa)
hs2st1bHeparan sulfate 2-O-sulfotransferase 1b. (356 aa)
dvl3aDishevelled segment polarity protein 3a. (676 aa)
ptk7aProtein tyrosine kinase 7a; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1061 aa)
spint2Serine peptidase inhibitor, Kunitz type, 2. (431 aa)
vegfcVascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. (396 aa)
sfrp2Secreted frizzled-related protein 2. (294 aa)
dlx6aHomeobox protein Dlx6a. (247 aa)
dvl1bDishevelled segment polarity protein 1b. (716 aa)
dlx5aHomeobox protein Dlx5a; Belongs to the distal-less homeobox family. (282 aa)
cecr2CECR2 histone acetyl-lysine reader. (1502 aa)
fuzFuzzy planar cell polarity protein. (420 aa)
prkacabProtein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily. (351 aa)
tctn1Tectonic family member 1. (534 aa)
wnt6bProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (355 aa)
bbs4Bardet-Biedl syndrome 4. (528 aa)
foxc1aForkhead box C1-A; DNA-binding transcriptional factor that plays a role in a broad range of cellular and developmental processes such as eye, bones, cardiovascular, kidney and skin development. Acts either as a transcriptional activator or repressor. Binds to the consensus binding site 5'-[G/C][A/T]AAA[T/C]AA[A/C]-3' in promoter of target genes. Upon DNA-binding, promotes DNA bending. Required for cell viability and resistance to oxidative stress in the eye. Promotes cell growth inhibition by stopping the cell cycle in the G1 phase through TGFB1- mediated signals. Involved in epithelia [...] (476 aa)
LOC100332300Gremlin 1a, DAN family BMP antagonist. (177 aa)
deaf1DEAF1 transcription factor. (528 aa)
setd2SET domain-containing 2, histone lysine methyltransferase. (2737 aa)
cthrc1aCollagen triple helix repeat-containing 1a. (232 aa)
kdm6aLysine (K)-specific demethylase 6A. (1390 aa)
cthrc1bCollagen triple helix repeat-containing 1b. (233 aa)
gdf7Growth differentiation factor 7. (396 aa)
tsc1bTSC complex subunit 1b. (1228 aa)
dvl1aDishevelled segment polarity protein 1a. (569 aa)
mthfrMethylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (656 aa)
tgfb1bTransforming growth factor beta; Belongs to the TGF-beta family. (379 aa)
hoxb1bHomeobox protein Hox-B1b; Sequence-specific transcription factor. Part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Acts on the anterior body structures. Seems to act in the maintenance and/or generation of hindbrain segments; Belongs to the Antp homeobox family. Labial subfamily. (229 aa)
mpp5aMAGUK p55 subfamily member 5-A; Plays a role in tight junction biogenesis and in the establishment of cell polarity in epithelial cells (By similarity). Also involved in adherens junction biogenesis (By similarity). Functions in cellular patterning of the retina. (703 aa)
F8W5A4_DANRESi:ch73-236e11.2. (120 aa)
grsf1G-rich RNA sequence-binding factor 1. (403 aa)
abl1Tyrosine-protein kinase. (1081 aa)
shhaSonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). (418 aa)
grem2aGremlin 2, DAN family BMP antagonist a. (195 aa)
tsc2TSC complex subunit 2. (1674 aa)
mib1E3 ubiquitin-protein ligase mib1; E3 ubiquitin-protein ligase that mediates ubiquitination of Delta receptors, which act as ligands of Notch proteins. Positively regulates the Delta-mediated Notch signaling by ubiquitinating the intracellular domain of Delta, leading to endocytosis of Delta receptors. It thereby participates in many processes regulated by the Notch signaling pathway, such as midline cell fate specification prior to germ layer formation, patterning of sensory cell differentiation in the ear, neurogenesis of the hindbrain and commitment to a secretory fate in the intesti [...] (1041 aa)
prkacaaProtein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily. (352 aa)
phactr4aPhosphatase and actin regulator 4A. (1011 aa)
irx1aIroquois homeobox protein 1, a. (426 aa)
lrrc1Leucine-rich repeat-containing 1. (438 aa)
mab21l1Putative nucleotidyltransferase MAB21L1; Putative nucleotidyltransferase required for several aspects of embryonic development including normal development of the eye (By similarity). It is unclear whether it displays nucleotidyltransferase activity in vivo. Binds single-stranded RNA (ssRNA) (By similarity). Belongs to the mab-21 family. (359 aa)
irx3aIroquois 3 homeobox protein. (454 aa)
hs2st1aHeparan sulfate 2-O-sulfotransferase 1a. (354 aa)
dvl3Dishevelled segment polarity protein 3b. (706 aa)
nkd1Protein naked cuticle homolog 1; Cell autonomous antagonist of the canonical Wnt signaling pathway. May activate a second Wnt signaling pathway that controls planar cell polarity (By similarity); Belongs to the NKD family. (440 aa)
phactr4a-2Phosphatase and actin regulator 4A; Regulator of protein phosphatase 1 (PP1) required for neural tube and optic fissure closure, and enteric neural crest cell (ENCCs) migration during development. Acts as an activator of PP1. During neural tube closure, localizes to the ventral neural tube and activates PP1, leading to down-regulate cell proliferation within cranial neural tissue and the neural retina. Also acts as a regulator of migration of enteric neural crest cells (ENCCs) by activating PP1, leading to repression of the integrin signaling through the rho/rock pathway (By similarity). (118 aa)
kdf1aKeratinocyte differentiation factor 1a. (383 aa)
sfrp2lSecreted frizzled-related protein 2-like. (333 aa)
spint1aSerine peptidase inhibitor, Kunitz type 1 a. (523 aa)
mthfd1aC-1-tetrahydrofolate synthase, cytoplasmic isoform X2. (919 aa)
ENSDARP00000153246Ig-like domain-containing protein. (160 aa)
ENSDARP00000153406DUF3384 domain-containing protein. (162 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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