STRINGSTRING
sp8a sp8a tbx4 tbx4 dkk1a dkk1a tbx3a tbx3a tbx2a tbx2a fbxw4 fbxw4 sall4 sall4 LOC405768 LOC405768 ift52 ift52 dkk1b dkk1b sp8b sp8b mks1 mks1 sfrp2 sfrp2 bcl2l11 bcl2l11 smad4a smad4a gb:cr929477 gb:cr929477 fgf9 fgf9 rpgrip1l rpgrip1l tbx3b tbx3b ift140 ift140 lef1 lef1 Q1L8R8_DANRE Q1L8R8_DANRE frem3 frem3 E7FFZ5_DANRE E7FFZ5_DANRE wdpcp wdpcp frem2b frem2b fgf4 fgf4 fras1 fras1 sp9 sp9 msx1a msx1a hoxc10a hoxc10a sfrp2l sfrp2l wdr19 wdr19 zak zak en1b en1b Alx3 Alx3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sp8aSp8 transcription factor a. (406 aa)
tbx4T-box transcription factor 4. (543 aa)
dkk1aDickkopf WNT-signaling pathway inhibitor 1a. (256 aa)
tbx3aT-box transcription factor 3a. (689 aa)
tbx2aT-box transcription factor 2a. (686 aa)
fbxw4F-box and WD repeat domain-containing 4. (392 aa)
sall4Spalt-like transcription factor 4. (1091 aa)
LOC405768Sterile alpha motif and leucine zipper-containing kinase AZK. (371 aa)
ift52Intraflagellar transport 52 homolog (Chlamydomonas). (435 aa)
dkk1bDickkopf WNT-signaling pathway inhibitor 1b. (241 aa)
sp8bTranscription factor Sp8; Transcription factor which plays a key role in limb development. Positively regulates FGF8 expression in the apical ectodermal ridge (AER) and contributes to limb outgrowth in embryos. Belongs to the Sp1 C2H2-type zinc-finger protein family. (455 aa)
mks1MKS transition zone complex subunit 1. (559 aa)
sfrp2Secreted frizzled-related protein 2. (294 aa)
bcl2l11BCL2-like 11. (176 aa)
smad4aMothers against decapentaplegic homolog. (547 aa)
gb:cr929477SMAD family member 4. (332 aa)
fgf9Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (142 aa)
rpgrip1lRPGRIP1-like. (1256 aa)
tbx3bT-box transcription factor 3b. (594 aa)
ift140Intraflagellar transport 140 homolog (Chlamydomonas). (1445 aa)
lef1Lymphocyte enhancer binding factor 1 Lef1. (365 aa)
Q1L8R8_DANREMothers against decapentaplegic homolog. (571 aa)
frem3Fras1-related extracellular matrix 3. (3075 aa)
E7FFZ5_DANREMothers against decapentaplegic homolog. (568 aa)
wdpcpWD repeat-containing planar cell polarity effector. (707 aa)
frem2bFRAS1-related extracellular matrix 2b. (3116 aa)
fgf4Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (191 aa)
fras1Fraser extracellular matrix complex subunit 1. (4003 aa)
sp9Transcription factor Sp9; Transcription factor which plays a key role in limb development. Positively regulates FGF8 expression in the apical ectodermal ridge (AER) and contributes to limb outgrowth in embryos. (439 aa)
msx1aMuscle segment homeobox 1a. (233 aa)
hoxc10aHomeobox C10a. (337 aa)
sfrp2lSecreted frizzled-related protein 2-like. (333 aa)
wdr19WD repeat domain 19. (1372 aa)
zakSterile alpha motif and leucine zipper-containing kinase AZK. (789 aa)
en1bHomeobox protein engrailed-like. (274 aa)
Alx3Uncharacterized protein. (146 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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