28 items (Danio rerio) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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textmining

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protein homology

Your Input:
	myo3b	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1272 aa)
	kptn	Kaptin (actin-binding protein). (436 aa)
	adgrv1	Adhesion G-protein coupled receptor V1; Receptor that may have an important role in the development of the sensory nervous system. (6198 aa)
	myo1ca	Unconventional myosin-Ic; Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments (By similarity). (1045 aa)
	ush2a	Usher syndrome 2A (autosomal recessive, mild). (5236 aa)
	ripor2	Rho family-interacting cell polarization regulator 2; Acts as an inhibitor of the small GTPase RHOA and plays several roles in the regulation of myoblast and hair cell differentiation, lymphocyte T proliferation and neutrophil polarization (By similarity). Plays a role in fetal mononuclear myoblast differentiation by promoting filopodia and myotube formation. Maintains naive T lymphocytes in a quiescent state and prevents chemokine-induced T lymphocyte responses, such as cell adhesion, polarization and migration. Involved also in the regulation of neutrophil polarization, chemotaxis an [...] (1083 aa)
	tspeara	Thrombospondin-type laminin G domain and EAR repeats a. (676 aa)
	morn4	MORN repeat-containing 4. (146 aa)
	whrna	Whirlin a. (939 aa)
	ush1c	Usher syndrome 1C (Autosomal recessive, severe). (548 aa)
	tspearb	Thrombospondin-type laminin G domain and EAR repeats b. (666 aa)
	myo3a	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1775 aa)
	elmod3	ELMO/CED-12 domain-containing 3. (327 aa)
	ripor3	RIPOR family member 3; Belongs to the RIPOR family. (997 aa)
	whrnb	Whirlin b. (946 aa)
	loxhd1b	Lipoxygenase homology domains 1b. (2215 aa)
	espnlb	Espin-like b. (1004 aa)
	espn	Espin. (873 aa)
	grxcr1b	Glutaredoxin and cysteine-rich domain-containing 1 b. (148 aa)
	pjvk	Pejvakin. (361 aa)
	myo1cb	Myosin Ic, paralog b; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1028 aa)
	espnla	Espin-like a. (925 aa)
	dock4b	Dedicator of cytokinesis 4b; Belongs to the DOCK family. (1993 aa)
	tprn	Taperin. (758 aa)
	pdzd7a	PDZ domain-containing 7a. (954 aa)
	clrn1	Clrn1 protein. (232 aa)
	grxcr1a	Glutaredoxin and cysteine-rich domain-containing 1 a. (295 aa)
	strc1	Stereocilin 1. (2032 aa)

Your Current Organism:

Danio rerio

NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
adgrv1	clrn1	ENSDARP00000020853	ENSDARP00000140380	Adhesion G-protein coupled receptor V1; Receptor that may have an important role in the development of the sensory nervous system.	Clrn1 protein.	0.875
adgrv1	espn	ENSDARP00000020853	ENSDARP00000123042	Adhesion G-protein coupled receptor V1; Receptor that may have an important role in the development of the sensory nervous system.	Espin.	0.603
adgrv1	grxcr1b	ENSDARP00000020853	ENSDARP00000123503	Adhesion G-protein coupled receptor V1; Receptor that may have an important role in the development of the sensory nervous system.	Glutaredoxin and cysteine-rich domain-containing 1 b.	0.644
adgrv1	loxhd1b	ENSDARP00000020853	ENSDARP00000119539	Adhesion G-protein coupled receptor V1; Receptor that may have an important role in the development of the sensory nervous system.	Lipoxygenase homology domains 1b.	0.504
adgrv1	pdzd7a	ENSDARP00000020853	ENSDARP00000139792	Adhesion G-protein coupled receptor V1; Receptor that may have an important role in the development of the sensory nervous system.	PDZ domain-containing 7a.	0.988
adgrv1	strc1	ENSDARP00000020853	ENSDARP00000151799	Adhesion G-protein coupled receptor V1; Receptor that may have an important role in the development of the sensory nervous system.	Stereocilin 1.	0.531
adgrv1	ush1c	ENSDARP00000020853	ENSDARP00000104974	Adhesion G-protein coupled receptor V1; Receptor that may have an important role in the development of the sensory nervous system.	Usher syndrome 1C (Autosomal recessive, severe).	0.971
adgrv1	ush2a	ENSDARP00000020853	ENSDARP00000080636	Adhesion G-protein coupled receptor V1; Receptor that may have an important role in the development of the sensory nervous system.	Usher syndrome 2A (autosomal recessive, mild).	0.991
adgrv1	whrna	ENSDARP00000020853	ENSDARP00000102025	Adhesion G-protein coupled receptor V1; Receptor that may have an important role in the development of the sensory nervous system.	Whirlin a.	0.993
adgrv1	whrnb	ENSDARP00000020853	ENSDARP00000119523	Adhesion G-protein coupled receptor V1; Receptor that may have an important role in the development of the sensory nervous system.	Whirlin b.	0.974
clrn1	adgrv1	ENSDARP00000140380	ENSDARP00000020853	Clrn1 protein.	Adhesion G-protein coupled receptor V1; Receptor that may have an important role in the development of the sensory nervous system.	0.875
clrn1	espn	ENSDARP00000140380	ENSDARP00000123042	Clrn1 protein.	Espin.	0.471
clrn1	pdzd7a	ENSDARP00000140380	ENSDARP00000139792	Clrn1 protein.	PDZ domain-containing 7a.	0.910
clrn1	strc1	ENSDARP00000140380	ENSDARP00000151799	Clrn1 protein.	Stereocilin 1.	0.515
clrn1	ush1c	ENSDARP00000140380	ENSDARP00000104974	Clrn1 protein.	Usher syndrome 1C (Autosomal recessive, severe).	0.956
clrn1	ush2a	ENSDARP00000140380	ENSDARP00000080636	Clrn1 protein.	Usher syndrome 2A (autosomal recessive, mild).	0.914
clrn1	whrna	ENSDARP00000140380	ENSDARP00000102025	Clrn1 protein.	Whirlin a.	0.929
clrn1	whrnb	ENSDARP00000140380	ENSDARP00000119523	Clrn1 protein.	Whirlin b.	0.892
espn	adgrv1	ENSDARP00000123042	ENSDARP00000020853	Espin.	Adhesion G-protein coupled receptor V1; Receptor that may have an important role in the development of the sensory nervous system.	0.603
espn	clrn1	ENSDARP00000123042	ENSDARP00000140380	Espin.	Clrn1 protein.	0.471

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