STRINGSTRING
tprb tprb rad18 rad18 atxn1a atxn1a nup98 nup98 atxn1b atxn1b slf1 slf1 tpra tpra RANBP2 RANBP2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tprbTranslocated promoter region b, nuclear basket protein. (2352 aa)
rad18RAD18 E3 ubiquitin protein ligase. (426 aa)
atxn1aAtaxin 1a. (781 aa)
nup98Nucleoporin 98. (1814 aa)
atxn1bAtaxin 1b. (827 aa)
slf1SMC5-SMC6 complex localization factor 1. (897 aa)
tpraTranslocated promoter region a, nuclear basket protein. (2363 aa)
RANBP2Si:ch1073-55a19.2. (2953 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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