25 items (Danio rerio) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Others

textmining

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protein homology

Your Input:
	WDR1	WD repeat domain 1. (606 aa)
	csrp1a	Cysteine and glycine-rich protein 1a. (192 aa)
	klhl41b	Kelch-like protein 41b; Involved in skeletal muscle development and maintenance. (605 aa)
	orai1b	Calcium release-activated calcium channel protein 1; Ca(2+) release-activated Ca(2+) (CRAC) channel subunit which mediates Ca(2+) influx following depletion of intracellular Ca(2+) stores; Belongs to the Orai family. (222 aa)
	tcap	Titin-cap (telethonin). (179 aa)
	tnnt2c	Troponin T1, skeletal, slow. (290 aa)
	csrp1b	Cysteine and glycine-rich protein 1b. (192 aa)
	myoz2a	Myozenin 2a. (264 aa)
	myoz1a	Zgc:77785 protein. (319 aa)
	srfa	Serum response factor a. (539 aa)
	ldb3a	Cypher/ZASP splice variant 1 gamma. (596 aa)
	klhl41a	Kelch-like protein 41a; Involved in skeletal muscle development and differentiation. (599 aa)
	tnnt3a	Troponin T type 3a (skeletal, fast). (230 aa)
	lrrc39	Leucine-rich repeat-containing protein 39; Component of the sarcomeric M-band which plays a role in myocyte response to biomechanical stress (By similarity). May regulate expression of other M-band proteins via an SRF-dependent pathway (By similarity). Important for normal contractile function in heart. (343 aa)
	csrp2	Cysteine and glycine-rich protein 2. (193 aa)
	tnnt2d	Troponin T2d, cardiac. (241 aa)
	tnnt3b	Troponin T type 3b (skeletal, fast). (284 aa)
	myoz2b	Myozenin 2b. (226 aa)
	tnnt2a	Troponin T type 2a (cardiac). (282 aa)
	tnnt2b	Troponin T type 2b (cardiac). (233 aa)
	LOC108190739	Myozenin-2-like. (122 aa)
	tnnt2e	Novel slow skeletal troponin T family protein. (285 aa)
	srfb	Serum response factor b. (260 aa)
	csrp3	Cysteine and glycine-rich protein 3 (cardiac LIM protein). (193 aa)
	tnnt1	Troponin T type 1 (skeletal, slow). (342 aa)

Your Current Organism:

Danio rerio

NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108190739	csrp3	ENSDARP00000130804	ENSDARP00000138514	Myozenin-2-like.	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	0.649
LOC108190739	ldb3a	ENSDARP00000130804	ENSDARP00000073218	Myozenin-2-like.	Cypher/ZASP splice variant 1 gamma.	0.428
csrp3	LOC108190739	ENSDARP00000138514	ENSDARP00000130804	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Myozenin-2-like.	0.649
csrp3	klhl41a	ENSDARP00000138514	ENSDARP00000090560	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Kelch-like protein 41a; Involved in skeletal muscle development and differentiation.	0.423
csrp3	ldb3a	ENSDARP00000138514	ENSDARP00000073218	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Cypher/ZASP splice variant 1 gamma.	0.628
csrp3	myoz1a	ENSDARP00000138514	ENSDARP00000060575	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Zgc:77785 protein.	0.441
csrp3	myoz2a	ENSDARP00000138514	ENSDARP00000049927	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Myozenin 2a.	0.906
csrp3	myoz2b	ENSDARP00000138514	ENSDARP00000123605	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Myozenin 2b.	0.649
csrp3	tcap	ENSDARP00000138514	ENSDARP00000027408	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Titin-cap (telethonin).	0.981
csrp3	tnnt2a	ENSDARP00000138514	ENSDARP00000124963	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Troponin T type 2a (cardiac).	0.775
klhl41a	csrp3	ENSDARP00000090560	ENSDARP00000138514	Kelch-like protein 41a; Involved in skeletal muscle development and differentiation.	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	0.423
klhl41a	myoz1a	ENSDARP00000090560	ENSDARP00000060575	Kelch-like protein 41a; Involved in skeletal muscle development and differentiation.	Zgc:77785 protein.	0.772
klhl41a	tnnt3b	ENSDARP00000090560	ENSDARP00000121128	Kelch-like protein 41a; Involved in skeletal muscle development and differentiation.	Troponin T type 3b (skeletal, fast).	0.496
klhl41b	srfb	ENSDARP00000012238	ENSDARP00000134321	Kelch-like protein 41b; Involved in skeletal muscle development and maintenance.	Serum response factor b.	0.669
ldb3a	LOC108190739	ENSDARP00000073218	ENSDARP00000130804	Cypher/ZASP splice variant 1 gamma.	Myozenin-2-like.	0.428
ldb3a	csrp3	ENSDARP00000073218	ENSDARP00000138514	Cypher/ZASP splice variant 1 gamma.	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	0.628
ldb3a	myoz2a	ENSDARP00000073218	ENSDARP00000049927	Cypher/ZASP splice variant 1 gamma.	Myozenin 2a.	0.518
ldb3a	myoz2b	ENSDARP00000073218	ENSDARP00000123605	Cypher/ZASP splice variant 1 gamma.	Myozenin 2b.	0.465
myoz1a	csrp3	ENSDARP00000060575	ENSDARP00000138514	Zgc:77785 protein.	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	0.441
myoz1a	klhl41a	ENSDARP00000060575	ENSDARP00000090560	Zgc:77785 protein.	Kelch-like protein 41a; Involved in skeletal muscle development and differentiation.	0.772

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