STRINGSTRING
maml1 maml1 fgf6a fgf6a rb1 rb1 grem1a grem1a hinfp hinfp zgc:112083 zgc:112083 ddx5 ddx5 fgf6b fgf6b srfa srfa lgals2a lgals2a DDX17 DDX17 LOC100332300 LOC100332300 lgals2b lgals2b grem2a grem2a srfb srfb bcl9 bcl9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
maml1Mastermind-like transcriptional coactivator 1. (1057 aa)
fgf6aFibroblast growth factor; Belongs to the heparin-binding growth factors family. (205 aa)
rb1Retinoblastoma 1. (903 aa)
grem1aGremlin. (177 aa)
hinfpHistone H4 transcription factor. (487 aa)
zgc:112083Zgc:112083 protein. (504 aa)
ddx5DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (617 aa)
fgf6bFibroblast growth factor; Belongs to the heparin-binding growth factors family. (209 aa)
srfaSerum response factor a. (539 aa)
lgals2aGalectin. (134 aa)
DDX17Si:dkey-156n14.5; Belongs to the DEAD box helicase family. (671 aa)
LOC100332300Gremlin 1a, DAN family BMP antagonist. (177 aa)
lgals2bGalectin. (132 aa)
grem2aGremlin 2, DAN family BMP antagonist a. (195 aa)
srfbSerum response factor b. (260 aa)
bcl9BCL9 transcription coactivator. (1573 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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