STRINGSTRING
her15.2 her15.2 kdf1a kdf1a mafgb mafgb rock1 rock1 macroh2a1 macroh2a1 kdf1b kdf1b numa1 numa1 errfi1a errfi1a mafga mafga grhl2a grhl2a ptch1 ptch1 ENSDARP00000125042 ENSDARP00000125042 grhl2b grhl2b grhl1 grhl1 rock2a rock2a macroh2a2 macroh2a2 klf7a klf7a klf7b klf7b her15.1 her15.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
her15.2Zgc:136520 protein. (149 aa)
kdf1aKeratinocyte differentiation factor 1a. (383 aa)
mafgbV-maf musculoaponeurotic fibrosarcoma oncogene homolog g (Avian), 2. (171 aa)
rock1Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1359 aa)
macroh2a1Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (357 aa)
kdf1bKeratinocyte differentiation factor 1b. (334 aa)
numa1Wu:fb44b02. (2450 aa)
errfi1aERBB receptor feedback inhibitor 1a. (447 aa)
mafgaV-maf musculoaponeurotic fibrosarcoma oncogene family, protein g (Avian), 1. (162 aa)
grhl2aGrainyhead-like transcription factor 2a. (593 aa)
ptch1Protein patched homolog 1. (1475 aa)
ENSDARP00000125042Patched 1. (120 aa)
grhl2bGrainyhead-like transcription factor 2b. (601 aa)
grhl1Grainyhead-like transcription factor 1. (613 aa)
rock2aRho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1375 aa)
macroh2a2Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (367 aa)
klf7aKruppel-like factor 7a. (286 aa)
klf7bKruppel-like factor 7 (Ubiquitous), like. (295 aa)
her15.1Hairy and enhancer of split-related 15, tandem duplicate 1. (149 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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