STRINGSTRING
csrnp1b csrnp1b zfand5a zfand5a zfand5b zfand5b pdgfrl pdgfrl zgc:77486 zgc:77486 abl2 abl2 txnipa txnipa pdgfc pdgfc flt3 flt3 ston1 ston1 pdgfra pdgfra pdgfaa pdgfaa sgpl1 sgpl1 pdgfd pdgfd F1RB21_DANRE F1RB21_DANRE cspg4 cspg4 plekha1b plekha1b F1QK03_DANRE F1QK03_DANRE abl1 abl1 plekha1a plekha1a ENSDARP00000135075 ENSDARP00000135075 pdgfab pdgfab pdgfba pdgfba pdgfbb pdgfbb pdgfrb pdgfrb
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
csrnp1bCysteine-serine-rich nuclear protein 1b. (566 aa)
zfand5aZinc finger, AN1-type domain 5a. (213 aa)
zfand5bZinc finger, AN1-type domain 5b. (212 aa)
pdgfrlPlatelet-derived growth factor receptor-like. (371 aa)
zgc:77486Zgc:77486. (238 aa)
abl2Tyrosine-protein kinase. (1135 aa)
txnipaThioredoxin-interacting protein a. (400 aa)
pdgfcPlatelet-derived growth factor c; Belongs to the PDGF/VEGF growth factor family. (343 aa)
flt3Fms-related tyrosine kinase 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (956 aa)
ston1General transcription factor IIA, 1-like; Belongs to the adaptor complexes medium subunit family. (634 aa)
pdgfraPlatelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for pdgfa, pdgfb and pdgfc and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development. Required for normal development of the gastrointestinal tract. Plays a role in cell migration and chemotaxis in wound [...] (1456 aa)
pdgfaaPlatelet-derived growth factor alpha polypeptide a; Belongs to the PDGF/VEGF growth factor family. (194 aa)
sgpl1Sphingosine-1-phosphate lyase 1. (572 aa)
pdgfdPlatelet-derived growth factor d. (372 aa)
F1RB21_DANRESi:dkey-193c22.2. (2389 aa)
cspg4Chondroitin sulfate proteoglycan 4. (2305 aa)
plekha1bPleckstrin homology domain-containing, family A (phosphoinositide-binding-specific) member 1b. (401 aa)
F1QK03_DANRESi:dkeyp-41f9.3. (1041 aa)
abl1Tyrosine-protein kinase. (1081 aa)
plekha1aPleckstrin homology domain-containing, family A (phosphoinositide-binding-specific) member 1a. (401 aa)
ENSDARP00000135075Platelet-derived growth factor alpha polypeptide a. (194 aa)
pdgfabPlatelet-derived growth factor alpha polypeptide b; Belongs to the PDGF/VEGF growth factor family. (230 aa)
pdgfbaPlatelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (463 aa)
pdgfbbPlatelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (483 aa)
pdgfrbPlatelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1072 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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