STRINGSTRING
ldlrap1b ldlrap1b ppt1 ppt1 vtnb vtnb vtna vtna serpine1 serpine1 ntf3 ntf3 clul1 clul1 ccl19a.1 ccl19a.1 hspa8 hspa8 pick1 pick1 magi2b magi2b pcsk9 pcsk9 fmr1 fmr1 LOC100332300 LOC100332300 ENSDARP00000146183 ENSDARP00000146183 grem2a grem2a ahi1 ahi1 tbc1d5 tbc1d5 ccl19b ccl19b clu clu ldlrap1a ldlrap1a magi2a magi2a dab2 dab2 cd63 cd63 SCYL2 SCYL2 grem1a grem1a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ldlrap1bLow density lipoprotein receptor adaptor protein 1b. (304 aa)
ppt1Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile). (303 aa)
vtnbVitronectin b. (449 aa)
vtnaVitronectin a. (514 aa)
serpine1Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family. (392 aa)
ntf3Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family. (243 aa)
clul1Clusterin; Belongs to the clusterin family. (466 aa)
ccl19a.1C-C motif chemokine. (119 aa)
hspa8Heat shock cognate 71 kDa protein; Molecular chaperone implicated in a wide variety of cellular processes, including protection of the proteome from stress, folding and transport of newly synthesized polypeptides, activation of proteolysis of misfolded proteins and the formation and dissociation of protein complexes. Plays a pivotal role in the protein quality control system, ensuring the correct folding of proteins, the re-folding of misfolded proteins and controlling the targeting of proteins for subsequent degradation. This is achieved through cycles of ATP binding, ATP hydrolysis a [...] (649 aa)
pick1Protein-interacting with prkca 1. (406 aa)
magi2bMembrane-associated guanylate kinase, WW and PDZ domain-containing 2b. (1332 aa)
pcsk9Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family. (667 aa)
fmr1FMRP translational regulator 1. (569 aa)
LOC100332300Gremlin 1a, DAN family BMP antagonist. (177 aa)
ENSDARP00000146183Si:ch211-204c21.1. (697 aa)
grem2aGremlin 2, DAN family BMP antagonist a. (195 aa)
ahi1Abelson helper integration site 1. (1193 aa)
tbc1d5TBC1 domain family, member 5. (863 aa)
ccl19bChemokine (C-C motif) ligand 19b. (128 aa)
cluClusterin; Functions as extracellular chaperone that prevents aggregation of non native proteins. Prevents stress-induced aggregation of blood plasma proteins. (449 aa)
ldlrap1aLow density lipoprotein receptor adaptor protein 1a. (287 aa)
magi2aMembrane-associated guanylate kinase, WW and PDZ domain-containing 2a. (1503 aa)
dab2DAB adaptor protein 2. (589 aa)
cd63Tetraspanin. (237 aa)
SCYL2Si:ch211-244b2.1. (929 aa)
grem1aGremlin. (177 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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