STRINGSTRING
pex14 pex14 bcas3 bcas3 emd emd ENSDARP00000150236 ENSDARP00000150236 tbcd tbcd ttll7 ttll7 adnpa adnpa htt htt cct5 cct5 spast spast ift74 ift74 smc3 smc3 racgap1 racgap1 uxt uxt tbca tbca adnpb adnpb casc1 casc1 bbs4 bbs4 pacrg pacrg lrpprc lrpprc dlec1 dlec1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pex14Peroxisomal biogenesis factor 14. (423 aa)
bcas3BCAS3 microtubule-associated cell migration factor. (910 aa)
emdEmerin (Emery-Dreifuss muscular dystrophy). (182 aa)
ENSDARP00000150236Si:ch1073-416j23.1. (671 aa)
tbcdTubulin folding cofactor D. (1191 aa)
ttll7Tubulin tyrosine ligase-like family, member 7. (917 aa)
adnpaActivity-dependent neuroprotector homeobox a. (969 aa)
httHuntingtin. (3121 aa)
cct5Chaperonin-containing TCP1, subunit 5 (epsilon). (541 aa)
spastSpastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Go [...] (570 aa)
ift74Intraflagellar transport 74. (583 aa)
smc3Structural maintenance of chromosomes protein. (1216 aa)
racgap1Rac GTPase-activating protein 1. (654 aa)
uxtUbiquitously-expressed, prefoldin-like chaperone. (155 aa)
tbcaTubulin-specific chaperone A; Belongs to the TBCA family. (108 aa)
adnpbActivity-dependent neuroprotector homeobox b. (1003 aa)
casc1Protein CASC1. (730 aa)
bbs4Bardet-Biedl syndrome 4. (528 aa)
pacrgPARK2 co-regulated. (236 aa)
lrpprcLeucine-rich pentatricopeptide repeat-containing. (1461 aa)
dlec1DLEC1 cilia and flagella-associated protein. (1701 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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