STRINGSTRING
tdrd7b tdrd7b buc2l buc2l buc buc ednrab ednrab tdrd5 tdrd5 Tdrd15 Tdrd15 LOC108192159 LOC108192159 paqr8 paqr8 ythdf2 ythdf2 zgc:171778 zgc:171778 zp3.2 zp3.2 zglp1 zglp1 ENSDARP00000141388 ENSDARP00000141388 Zcchc11 Zcchc11 YTHDC2 YTHDC2 lhb lhb X1WC78_DANRE X1WC78_DANRE tdrd1 tdrd1 moto moto ednraa ednraa henmt1 henmt1 tdrkh tdrkh zp3 zp3 gdf9 gdf9 ybx1 ybx1 atm atm mettl3 mettl3 star star tdrd7a tdrd7a dctn2 dctn2 paqr7b paqr7b ccnb1 ccnb1 dmc1 dmc1 pld6 pld6 mthfsd mthfsd rec8b rec8b tdrd6 tdrd6 tut4 tut4 edn1 edn1 tut7 tut7 brca2 brca2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tdrd7bTudor domain-containing protein 7B; Component of specific cytoplasmic RNA granules involved in post-transcriptional regulation of specific genes: probably acts by binding to specific mRNAs and regulating their translation. Probably required during spermatogenesis (By similarity). (1085 aa)
buc2lBucky ball 2-like. (962 aa)
bucBucky ball; Prion-like protein required for the formation of Balbiani body (electron-dense aggregates in the oocyte) and germ plasm assembly, and for the establishment of oocyte polarity during early oogenesis. Mobility and aggregation properties are improved by tudor domain-containing protein tdrd6 through interaction with dimethylated arginines Tri-RG domains. Establishes oocyte polarity through interactions with RNA-binding proteins rbpms2 and dazl, initiating a positive feedback loop amplification mechanism in the Balbiani body. Interaction of BUC protein and mRNA with rbpms2 and d [...] (639 aa)
ednrabEndothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family. (408 aa)
tdrd5Tudor domain-containing protein 5; Required during spermiogenesis to participate in the repression transposable elements and prevent their mobilization, which is essential for the germline integrity. Probably acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and govern the methylation and subsequent repression of transposons (By similarity). (905 aa)
Tdrd15Si:dkeyp-93d12.1. (1883 aa)
LOC108192159REC8 meiotic recombination protein a. (460 aa)
paqr8Progestin and adipoQ receptor family member VIII. (352 aa)
ythdf2YTH domain-containing family protein 2; Specifically recognizes and binds N6-methyladenosine (m6A)- containing RNAs, and regulates mRNA stability. M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing (By similarity). Plays a key role in maternal-to-zygotic transition during early embryonic development, the process during which maternally inherited mRNAs are degraded: acts by binding m6A-containing maternal mRNAs and promoting their degradation. More than one-third of maternal mRNAs can be modified by m6A. Bi [...] (613 aa)
zgc:171778Zona pellucida glycoprotein 3, tandem duplicate 2. (432 aa)
zp3.2Zona pellucida glycoprotein 3, tandem duplicate 2. (427 aa)
zglp1Zinc finger GATA-like protein 1. (351 aa)
ENSDARP00000141388Uncharacterized protein. (316 aa)
Zcchc11Uncharacterized protein. (654 aa)
YTHDC2YTH domain containing 2. (1415 aa)
lhbLuteinizing hormone, beta polypeptide. (140 aa)
X1WC78_DANRESi:ch211-189e2.3. (1814 aa)
tdrd1Tudor domain-containing protein 1; Plays a central role during spermatogenesis by participating in the repression transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Required for the localization of Piwi proteins to the meiotic nuage. Involved in the piRNA metabolic process by ensuring the entry of corr [...] (1176 aa)
motoMinamoto. (851 aa)
ednraaEndothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (422 aa)
henmt1Small RNA 2'-O-methyltransferase; Methyltransferase that adds a 2'-O-methyl group at the 3'-end of piRNAs, a class of 24 to 30 nucleotide RNAs that are generated by a Dicer-independent mechanism and are primarily derived from transposons and other repeated sequence elements. This probably protects the 3'-end of piRNAs from uridylation and adenylation activities and subsequent degradation. Stabilization of piRNAs is essential for oocyte development. (402 aa)
tdrkhTudor and KH domain-containing. (573 aa)
zp3Zona pellucida glycoprotein 3, tandem duplicate 2. (431 aa)
gdf9Growth differentiation factor 9. (418 aa)
ybx1Y-box-binding protein 1; DNA- and RNA-binding protein involved in various processes, such as translational repression, RNA stabilization, mRNA splicing and transcription regulation. Binds preferentially to the 5'-[CU]CUGCG-3' RNA motif and specifically recognizes mRNA transcripts modified by C5-methylcytosine (m5C). Promotes mRNA stabilization: acts by binding to m5C- containing mRNAs and recruiting pabpc1a, thereby preventing mRNA decay. Plays a role in the maternal-to-zygotic transition in early embryo by binding to m5C-containing maternal mRNAs and preventing their degradation. Also [...] (309 aa)
atmNon-specific serine/threonine protein kinase. (3091 aa)
mettl3N6-adenosine-methyltransferase subunit METTL3; The METTL3-METTL14 heterodimer forms a N6-methyltransferase complex that methylates adenosine residues at the N(6) position of some RNAs and regulates various processes such as the circadian clock, differentiation of embryonic and hematopoietic stem cells, cortical neurogenesis, response to DNA damage, differentiation of T-cells and primary miRNA processing. In the heterodimer formed with mettl14, mettl3 constitutes the catalytic core (By similarity). N6-methyladenosine (m6A), which takes place at the 5'-[AG]GAC-3' consensus sites of some [...] (584 aa)
starSteroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone (By similarity). (285 aa)
tdrd7aTudor domain-containing protein 7A; Component of specific cytoplasmic RNA granules involved in post-transcriptional regulation of specific genes: probably acts by binding to specific mRNAs and regulating their translation. Probably required during spermatogenesis (By similarity). Required for structural integrity of granules in primordial germ cells (PGCs). (1079 aa)
dctn2Dynactin subunit 2; Modulates cytoplasmic dynein binding to an organelle, and plays a role in prometaphase chromosome alignment and spindle organization during mitosis. Involved in anchoring microtubules to centrosomes. May play a role in synapse formation during brain development (By similarity). (405 aa)
paqr7bMembrane progestin receptor alpha-B; Steroid membrane receptor. Signals upon progestin binding, resulting in rapid activation of MAPK and down-regulation of adenylyl cyclase activity. Interacts with steroids with varying degrees of affinity, showing specificity for activation by the maturation-inducing steroid (MIS) 4-pregnen-17,20beta-diol-3-one (17,20beta-DHP). Capable of mediating progestin-induced oocyte maturation. (354 aa)
ccnb1Cyclin B1; Belongs to the cyclin family. (397 aa)
dmc1Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily. (342 aa)
pld6Mitochondrial cardiolipin hydrolase; Regulates mitochondrial shape through facilitating mitochondrial fusion. During spermatogenesis, plays a critical role in PIWI-interacting RNA (piRNA) biogenesis (By similarity). piRNAs provide essential protection against the activity of mobile genetic elements. piRNA-mediated transposon silencing is thus critical for maintaining genome stability, in particular in germline cells when transposons are mobilized as a consequence of wide-spread genomic demethylation. Has been shown to be a backbone-non-specific, single strand-specific nuclease, cleavin [...] (227 aa)
mthfsdMethenyltetrahydrofolate synthase domain-containing protein. (382 aa)
rec8bREC8 meiotic recombination protein b. (564 aa)
tdrd6Tudor domain-containing 6; Tudor domain-containing protein involved in germ cell development, more specifically the formation of chromatoid body (during spermiogenesis), Balbiani body (during oogenesis), germ plasm (upon fertilization), and for proper miRNA expression and spliceosome maturation (By similarity). Required for Balbiani body and germ plasm formation and mobility through interaction with dimethylated arginines in the prion-like protein Bucky ball (buc). Coordinates transcript deposition into future primordial germ cells. Interacts with known germ plasm mRNAs such as vasa, d [...] (2117 aa)
tut4Terminal uridylyl transferase 4. (133 aa)
edn1Endothelin 1. (188 aa)
tut7Uncharacterized protein. (841 aa)
brca2BRCA2 DNA repair-associated. (2874 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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