STRINGSTRING
LOC798191 LOC798191 mcm6l mcm6l tbx21 tbx21 mdkb mdkb fgl2a fgl2a tnfrsf21 tnfrsf21 mdka mdka socs1a socs1a arg2 arg2 lrrc32 lrrc32 lgals9l3 lgals9l3 tgfb1a tgfb1a cebpb cebpb pawr pawr glmna glmna sdc4 sdc4 E7FCG4_DANRE E7FCG4_DANRE ripor2 ripor2 gpnmb gpnmb rc3h2 rc3h2 vsir vsir crfb16 crfb16 lgals9l1 lgals9l1 dlg5a dlg5a arg1 arg1 dlg5b.1 dlg5b.1 vtcn1 vtcn1 loxl3b loxl3b crtam crtam hlx1 hlx1 tmem131l tmem131l ripor3 ripor3 zgc:153759 zgc:153759 pag1 pag1 rc3h1b rc3h1b tgfb1b tgfb1b F1QSM4_DANRE F1QSM4_DANRE zgc:153759-2 zgc:153759-2 mad1l1 mad1l1 zc3h12a zc3h12a march7 march7 loxl3a loxl3a itcha itcha itchb itchb ENSDARP00000134264 ENSDARP00000134264 B8JJU9_DANRE B8JJU9_DANRE irf1b irf1b fgl1 fgl1 cbfb cbfb ENSDARP00000148959 ENSDARP00000148959 ENSDARP00000150473 ENSDARP00000150473 rc3h1a rc3h1a march7-2 march7-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC798191Si:dkey-23c22.7. (234 aa)
mcm6lDNA helicase; Belongs to the MCM family. (824 aa)
tbx21T-box transcription factor 21. (609 aa)
mdkbMidkine-related growth factor Mdk2. (147 aa)
fgl2aFibrinogen-like 2a. (451 aa)
tnfrsf21Tumor necrosis factor receptor superfamily, member 21. (637 aa)
mdkaMidkine-related growth factor Mdk1. (146 aa)
socs1aSuppressor of cytokine-signaling 1a. (201 aa)
arg2Arginase. (347 aa)
lrrc32Leucine-rich repeat-containing 32. (659 aa)
lgals9l3Galectin. (320 aa)
tgfb1aTransforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
cebpbCCAAT/enhancer-binding protein. (280 aa)
pawrPRKC, apoptosis, WT1, regulator like. (305 aa)
glmnaGlomulin, FKBP-associated protein a. (592 aa)
sdc4Syndecan 4. (207 aa)
E7FCG4_DANRESi:ch211-157b11.8. (392 aa)
ripor2Rho family-interacting cell polarization regulator 2; Acts as an inhibitor of the small GTPase RHOA and plays several roles in the regulation of myoblast and hair cell differentiation, lymphocyte T proliferation and neutrophil polarization (By similarity). Plays a role in fetal mononuclear myoblast differentiation by promoting filopodia and myotube formation. Maintains naive T lymphocytes in a quiescent state and prevents chemokine-induced T lymphocyte responses, such as cell adhesion, polarization and migration. Involved also in the regulation of neutrophil polarization, chemotaxis an [...] (1083 aa)
gpnmbGlycoprotein (transmembrane) nmb. (627 aa)
rc3h2Ring finger and CCCH-type domains 2. (1028 aa)
vsirV-set immunoregulatory receptor. (275 aa)
crfb16Cytokine receptor family member B16. (300 aa)
lgals9l1Galectin. (310 aa)
dlg5aDiscs, large homolog 5a (Drosophila); Belongs to the MAGUK family. (1926 aa)
arg1Arginase. (341 aa)
dlg5b.1Discs, large homolog 5b (Drosophila), tandem duplicate 1; Belongs to the MAGUK family. (1888 aa)
vtcn1V-set domain-containing T cell activation inhibitor 1. (268 aa)
loxl3bLysyl oxidase homolog 3B; Protein-lysine 6-oxidase that mediates the oxidation of peptidyl lysine residues to allysine in target proteins (By similarity). Catalyzes the post-translational oxidative deamination of peptidyl lysine residues in precursors of elastin and different types of collagens, a prerequisite in the formation of cross-links between collagens and elastin (By similarity). Can mediate oxidation of lysine residues that are acetylated (By similarity). Also able to catalyze deacetylation of lysine residues (By similarity). Required for maturation of neural crest derived car [...] (807 aa)
crtamIg-like domain-containing protein. (436 aa)
hlx1H2.0-like homeo box 1 (Drosophila). (356 aa)
tmem131lTransmembrane 131-like. (1545 aa)
ripor3RIPOR family member 3; Belongs to the RIPOR family. (997 aa)
zgc:153759Zgc:153759. (266 aa)
pag1Phosphoprotein membrane anchor with glycosphingolipid microdomains 1. (405 aa)
rc3h1bRing finger and CCCH-type domains 1b. (1098 aa)
tgfb1bTransforming growth factor beta; Belongs to the TGF-beta family. (379 aa)
F1QSM4_DANRESi:ch211-203k16.3. (425 aa)
zgc:153759-2Zgc:153759. (285 aa)
mad1l1Mitotic arrest deficient-like protein 1. (717 aa)
zc3h12aZinc finger CCCH-type-containing 12A. (367 aa)
march7Membrane-associated ring finger (C3HC4) 7. (768 aa)
loxl3aLysyl oxidase homolog 3A; Protein-lysine 6-oxidase that mediates the oxidation of peptidyl lysine residues to allysine in target proteins. Catalyzes the post-translational oxidative deamination of peptidyl lysine residues in precursors of elastin and different types of collagens, a prerequisite in the formation of cross-links between collagens and elastin. Can mediate oxidation of lysine residues that are acetylated. Also able to catalyze deacetylation of lysine residues (By similarity). (791 aa)
itchaE3 ubiquitin-protein ligase. (851 aa)
itchbE3 ubiquitin-protein ligase. (842 aa)
ENSDARP00000134264Si:ch211-241b2.5. (465 aa)
B8JJU9_DANRESi:dkey-206d17.12. (626 aa)
irf1bInterferon regulatory factor. (287 aa)
fgl1Fibrinogen-like 1. (307 aa)
cbfbCore-binding factor subunit beta. (201 aa)
ENSDARP00000148959Si:dkey-23c22.5. (239 aa)
ENSDARP00000150473Si:ch211-261n11.7. (348 aa)
rc3h1aRing finger and CCCH-type domains 1a. (1111 aa)
march7-2Membrane-associated ring finger (C3HC4) 7. (179 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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