STRINGSTRING
ENSDARP00000151788 ENSDARP00000151788 apoa1b apoa1b slit1b slit1b UNC5C UNC5C sema3fb sema3fb ENSDARP00000146009 ENSDARP00000146009 sema6ba sema6ba SEMA4F SEMA4F pdgfab pdgfab sema5bb sema5bb sema5a sema5a sema6e sema6e ccdc137 ccdc137 ENSDARP00000135075 ENSDARP00000135075 ENSDARP00000134495 ENSDARP00000134495 sema6a sema6a lrtm1 lrtm1 flrt2-2 flrt2-2 flrt2 flrt2 LOC798168 LOC798168 F8W238_DANRE F8W238_DANRE sema6d sema6d flrt3 flrt3 sema4ba sema4ba F1Q5G8_DANRE F1Q5G8_DANRE slit3 slit3 unc5c unc5c sema3c sema3c sema4gb sema4gb sema7a sema7a nrg3b nrg3b slit1a slit1a sema3gb sema3gb sema4bb sema4bb sema4ga sema4ga sema4e sema4e sema4c sema4c M9MMA2_DANRE M9MMA2_DANRE pdgfaa pdgfaa sema3d sema3d sema6dl sema6dl sema4d sema4d sema4ab sema4ab sema6bb sema6bb ryk ryk sema3h sema3h sema3ab sema3ab nrp2b nrp2b sema3e sema3e sema3aa sema3aa sema3bl sema3bl sema3fa sema3fa sema3b sema3b slit2 slit2 sema3ga sema3ga lrtm2a lrtm2a sema5ba sema5ba
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSDARP00000151788Sema domain-containing protein; Belongs to the semaphorin family. (305 aa)
apoa1bApolipoprotein A-Ib. (257 aa)
slit1bSlit homolog 1b (Drosophila). (1532 aa)
UNC5CSi:ch73-72b7.1. (813 aa)
sema3fbSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (791 aa)
ENSDARP00000146009CUB domain-containing protein. (101 aa)
sema6baSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family. (895 aa)
SEMA4FSsemaphorin 4F; Belongs to the semaphorin family. (766 aa)
pdgfabPlatelet-derived growth factor alpha polypeptide b; Belongs to the PDGF/VEGF growth factor family. (230 aa)
sema5bbSemaphorin-5B. (1098 aa)
sema5aSemaphorin-5A. (1048 aa)
sema6eSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family. (1064 aa)
ccdc137Coiled-coil domain-containing 137. (242 aa)
ENSDARP00000135075Platelet-derived growth factor alpha polypeptide a. (194 aa)
ENSDARP00000134495Uncharacterized protein; Belongs to the semaphorin family. (482 aa)
sema6aSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A. (604 aa)
lrtm1Leucine-rich repeats and transmembrane domains 1. (356 aa)
flrt2-2Fibronectin leucine-rich transmembrane protein 2. (662 aa)
flrt2Fibronectin leucine-rich transmembrane protein 2. (662 aa)
LOC798168Semaphorin-4B-like; Belongs to the semaphorin family. (546 aa)
F8W238_DANRESi:ch211-113g11.6; Belongs to the semaphorin family. (474 aa)
sema6dSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D; Belongs to the semaphorin family. (898 aa)
flrt3Fibronectin leucine-rich transmembrane 3. (649 aa)
sema4baSemaphorin 4; Belongs to the semaphorin family. (830 aa)
F1Q5G8_DANRESi:dkey-49n23.1; Belongs to the semaphorin family. (758 aa)
slit3Slit homolog 3 (Drosophila). (1516 aa)
unc5cUnc-5 netrin receptor C. (746 aa)
sema3cSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C. (713 aa)
sema4gbSemaphorin-4G. (752 aa)
sema7aSemaphorin 7A; Belongs to the semaphorin family. (640 aa)
nrg3bNeuregulin 3b. (764 aa)
slit1aSlit homolog 1a (Drosophila). (1524 aa)
sema3gbSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb; Belongs to the semaphorin family. (745 aa)
sema4bbSemaphorin-4B; Belongs to the semaphorin family. (849 aa)
sema4gaSemaphorin-4G; Belongs to the semaphorin family. (883 aa)
sema4eSemaphorin-4E. (766 aa)
sema4cSemaphorin-4C precursor; Belongs to the semaphorin family. (863 aa)
M9MMA2_DANRESi:ch211-129c21.1; Belongs to the semaphorin family. (775 aa)
pdgfaaPlatelet-derived growth factor alpha polypeptide a; Belongs to the PDGF/VEGF growth factor family. (194 aa)
sema3dSemaphorin-3D; May play a role in the guidance of several axon pathways. (764 aa)
sema6dlSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D,-like. (1018 aa)
sema4dUncharacterized protein; Belongs to the semaphorin family. (856 aa)
sema4abSemaphorin-4A isoform X1; Belongs to the semaphorin family. (831 aa)
sema6bbSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb. (639 aa)
rykReceptor-like tyrosine kinase. (604 aa)
sema3hSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H; Belongs to the semaphorin family. (749 aa)
sema3abSemaphorin-3ab; Might normally influence the midsegmental pathway choice of the ventrally extending motor axons by contributing to a repulsive domain in the posterior somite. (778 aa)
nrp2bNeuropilin; Belongs to the neuropilin family. (920 aa)
sema3eSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family. (768 aa)
sema3aaSemaphorin-3aa; May influence outgrowth by a variety of growth cones including those of the posterior lateral line ganglion. (860 aa)
sema3blSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family. (771 aa)
sema3faSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (801 aa)
sema3bSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family. (775 aa)
slit2Slit homolog 2 (Drosophila). (1512 aa)
sema3gaSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga; Belongs to the semaphorin family. (749 aa)
lrtm2aLeucine-rich repeats and transmembrane domains 2a. (371 aa)
sema5baannotation not available (1101 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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