STRINGSTRING
bbs12 bbs12 cct2-2 cct2-2 cct2 cct2 lonp1 lonp1 bbs10 bbs10 ndufaf1 ndufaf1 tmem35 tmem35 ptges3b ptges3b F1QBW9_DANRE F1QBW9_DANRE psmg1 psmg1 pfdn6 pfdn6 psmg2 psmg2 hspa4a hspa4a mkks mkks hspa4b hspa4b psmg3 psmg3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bbs12Bardet-Biedl syndrome 12. (763 aa)
cct2-2Chaperonin-containing TCP1, subunit 2 (beta); Belongs to the TCP-1 chaperonin family. (110 aa)
cct2Chaperonin-containing TCP1, subunit 2 (beta); Belongs to the TCP-1 chaperonin family. (286 aa)
lonp1Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (966 aa)
bbs10Bardet-Biedl syndrome 10. (151 aa)
ndufaf1NADH:ubiquinone oxidoreductase complex assembly factor 1. (304 aa)
tmem35Transmembrane protein 35A. (160 aa)
ptges3bProstaglandin E synthase 3b (cytosolic). (158 aa)
F1QBW9_DANRESi:ch211-131k2.3. (155 aa)
psmg1Proteasome assembly chaperone 1; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with psmg2; Belongs to the PSMG1 family. (277 aa)
pfdn6Prefoldin subunit 6. (126 aa)
psmg2Proteasome assembly chaperone 2; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with psmg1; Belongs to the PSMG2 family. (260 aa)
hspa4aHeat shock protein 4, like. (833 aa)
mkksMcKusick-Kaufman syndrome. (563 aa)
hspa4bHeat shock protein 4b. (840 aa)
psmg3Proteasome (Prosome, macropain) assembly Chaperone 3. (122 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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