Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dhx36 | snrpd3 | ENSDARP00000139511 | ENSDARP00000011226 | DEAH (Asp-Glu-Ala-His) box polypeptide 36. | Small nuclear ribonucleoprotein Sm D3. | 0.428 |
| dhx36 | snrpd3l | ENSDARP00000139511 | ENSDARP00000100216 | DEAH (Asp-Glu-Ala-His) box polypeptide 36. | Small nuclear ribonucleoprotein Sm D3. | 0.428 |
| dkc1 | naf1 | ENSDARP00000007628 | ENSDARP00000114221 | Dyskeratosis congenita 1, dyskerin. | Nuclear assembly factor 1 homolog (S. cerevisiae). | 0.997 |
| dkc1 | nop10 | ENSDARP00000007628 | ENSDARP00000132783 | Dyskeratosis congenita 1, dyskerin. | H/ACA ribonucleoprotein complex subunit 3; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | 0.999 |
| dkc1 | pinx1 | ENSDARP00000007628 | ENSDARP00000104805 | Dyskeratosis congenita 1, dyskerin. | PIN2 (TERF1)-interacting telomerase inhibitor 1. | 0.422 |
| dkc1 | tert | ENSDARP00000007628 | ENSDARP00000124988 | Dyskeratosis congenita 1, dyskerin. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.992 |
| dkc1 | wrap53 | ENSDARP00000007628 | ENSDARP00000105980 | Dyskeratosis congenita 1, dyskerin. | WD repeat-containing, antisense to TP53. | 0.997 |
| naf1 | dkc1 | ENSDARP00000114221 | ENSDARP00000007628 | Nuclear assembly factor 1 homolog (S. cerevisiae). | Dyskeratosis congenita 1, dyskerin. | 0.997 |
| naf1 | nop10 | ENSDARP00000114221 | ENSDARP00000132783 | Nuclear assembly factor 1 homolog (S. cerevisiae). | H/ACA ribonucleoprotein complex subunit 3; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | 0.981 |
| naf1 | tert | ENSDARP00000114221 | ENSDARP00000124988 | Nuclear assembly factor 1 homolog (S. cerevisiae). | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.506 |
| nop10 | dkc1 | ENSDARP00000132783 | ENSDARP00000007628 | H/ACA ribonucleoprotein complex subunit 3; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | Dyskeratosis congenita 1, dyskerin. | 0.999 |
| nop10 | naf1 | ENSDARP00000132783 | ENSDARP00000114221 | H/ACA ribonucleoprotein complex subunit 3; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | Nuclear assembly factor 1 homolog (S. cerevisiae). | 0.981 |
| nop10 | smg5 | ENSDARP00000132783 | ENSDARP00000060808 | H/ACA ribonucleoprotein complex subunit 3; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | SMG5 nonsense mediated mRNA decay factor. | 0.608 |
| nop10 | smg6 | ENSDARP00000132783 | ENSDARP00000140752 | H/ACA ribonucleoprotein complex subunit 3; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | SMG6 nonsense mediated mRNA decay factor. | 0.653 |
| nop10 | smg7 | ENSDARP00000132783 | ENSDARP00000135427 | H/ACA ribonucleoprotein complex subunit 3; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | SMG7 nonsense mediated mRNA decay factor. | 0.601 |
| nop10 | tert | ENSDARP00000132783 | ENSDARP00000124988 | H/ACA ribonucleoprotein complex subunit 3; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.996 |
| nop10 | wrap53 | ENSDARP00000132783 | ENSDARP00000105980 | H/ACA ribonucleoprotein complex subunit 3; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | WD repeat-containing, antisense to TP53. | 0.998 |
| pinx1 | dkc1 | ENSDARP00000104805 | ENSDARP00000007628 | PIN2 (TERF1)-interacting telomerase inhibitor 1. | Dyskeratosis congenita 1, dyskerin. | 0.422 |
| pinx1 | tert | ENSDARP00000104805 | ENSDARP00000124988 | PIN2 (TERF1)-interacting telomerase inhibitor 1. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.611 |
| smg5 | nop10 | ENSDARP00000060808 | ENSDARP00000132783 | SMG5 nonsense mediated mRNA decay factor. | H/ACA ribonucleoprotein complex subunit 3; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | 0.608 |
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