STRINGSTRING
boc boc ENSDARP00000155118 ENSDARP00000155118 ENSDARP00000125042 ENSDARP00000125042 cdon cdon hhip hhip ptch2 ptch2 ptch1 ptch1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bocBOC cell adhesion-associated, oncogene-regulated. (1032 aa)
ENSDARP00000155118Uncharacterized protein. (350 aa)
ENSDARP00000125042Patched 1. (120 aa)
cdonCell adhesion molecule-related/down-regulated by oncogenes. (1125 aa)
hhipHedgehog-interacting protein. (693 aa)
ptch2Protein patched homolog 1; Acts as a receptor for sonic hedgehog (SHH), indian hedgehog (IHH) and desert hedgehog (DHH). Associates with the smoothened protein (SMO) to transduce the hedgehog's proteins signal (By similarity). Belongs to the patched family. (1442 aa)
ptch1Protein patched homolog 1. (1475 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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