STRINGSTRING
lrrk1 lrrk1 ptpn11b ptpn11b atp6ap1a atp6ap1a srfa srfa ptpn11a ptpn11a csf1ra csf1ra ptpn6 ptpn6 ep300a ep300a srfb srfb ep300b ep300b sh2b3 sh2b3 gp1bb gp1bb abi1a abi1a gp9 gp9 atp6ap1b atp6ap1b abi1b abi1b tnfsf11 tnfsf11 src src fam20ca fam20ca fam20cb fam20cb meis1a meis1a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lrrk1Leucine-rich repeat kinase 1. (1377 aa)
ptpn11bTyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (592 aa)
atp6ap1aATPase H+-transporting accessory protein 1a. (466 aa)
srfaSerum response factor a. (539 aa)
ptpn11aTyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (594 aa)
csf1raMacrophage colony-stimulating factor 1 receptor; Tyrosine-protein kinase that acts as cell-surface receptor for CSF1 and plays an essential role in the regulation of survival, proliferation and differentiation of hematopoietic precursor cells, especially mononuclear phagocytes, such as macrophages and monocytes. Plays an important role in innate immunity and in inflammatory processes. Plays an important role in the regulation of osteoclast proliferation and differentiation, the regulation of bone resorption, and is required for normal bone development. Promotes reorganization of the ac [...] (977 aa)
ptpn6Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (590 aa)
ep300aE1A-binding protein p300 a. (2679 aa)
srfbSerum response factor b. (260 aa)
ep300bE1A-binding protein p300 b. (2615 aa)
sh2b3SH2B adaptor protein 3. (596 aa)
gp1bbGlycoprotein Ib platelet subunit beta. (207 aa)
abi1aAbl-interactor 1a. (483 aa)
gp9Glycoprotein IX (platelet). (267 aa)
atp6ap1bATPase H+-transporting accessory protein 1b. (459 aa)
abi1bAbl-interactor 1b. (502 aa)
tnfsf11TNF superfamily member 11; Belongs to the tumor necrosis factor family. (251 aa)
srcProto-oncogene tyrosine-protein kinase Src; Non-receptor protein tyrosine kinase which is activated following engagement of many different classes of cellular receptors including immune response receptors, integrins and other adhesion receptors, receptor protein tyrosine kinases, G protein-coupled receptors as well as cytokine receptors. Participates in signaling pathways that control a diverse spectrum of biological activities including gene transcription, immune response, cell adhesion, cell cycle progression, apoptosis, migration, and transformation. Due to functional redundancy bet [...] (534 aa)
fam20caFAM20C golgi-associated secretory pathway kinase a. (545 aa)
fam20cbFAM20C golgi-associated secretory pathway kinase b. (557 aa)
meis1aMyeloid ecotropic viral integration site 4.1a. (380 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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