STRINGSTRING
tnfb tnfb timp4.3 timp4.3 sfrp2l sfrp2l traf2b traf2b ENSDARP00000142992 ENSDARP00000142992 madd madd il1b il1b fadd fadd pak2a pak2a unc5b unc5b rnf34b rnf34b rnf34a rnf34a birc6 birc6 nf1a nf1a cyldl cyldl E7F279_DANRE E7F279_DANRE cylda cylda deptor deptor tnfaip3 tnfaip3 cflarb cflarb ENSDARP00000122182 ENSDARP00000122182 nf1b nf1b eya3 eya3 ppp2r1ba ppp2r1ba LOC101885512 LOC101885512 gfral gfral cyldb cyldb skilb skilb zswim2 zswim2 g0s2 g0s2 lgals3a lgals3a scg2b scg2b rb1cc1 rb1cc1 zmynd11 zmynd11 ptprc ptprc F1QYY8_DANRE F1QYY8_DANRE src src sfrp2 sfrp2 traf1 traf1 ar ar pea15 pea15 zc3hc1 zc3hc1 fem1b fem1b sgk3 sgk3 gata1b gata1b serpine1 serpine1 cflara cflara htt htt dedd1 dedd1 zgc:171740 zgc:171740 lgals3b lgals3b itm2ca itm2ca itm2cb itm2cb skila skila LOC794408 LOC794408 map2k5 map2k5 agtr2 agtr2 rbck1 rbck1 pak2b pak2b traf2a traf2a faf1 faf1 atf3 atf3 tnfa tnfa srpx srpx gclm gclm faima faima agt agt gclc gclc ppp2r1bb ppp2r1bb unm_sa808 unm_sa808 fgb fgb itprip itprip faimb faimb psme3 psme3 rffl rffl gata1a gata1a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tnfbTumor necrosis factor b (TNF superfamily, member 2). (242 aa)
timp4.3TIMP metallopeptidase inhibitor 4, tandem duplicate 3. (198 aa)
sfrp2lSecreted frizzled-related protein 2-like. (333 aa)
traf2bTNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (545 aa)
ENSDARP00000142992Si:cabz01101003.1. (269 aa)
maddMAP-kinase-activating death domain. (1680 aa)
il1bInterleukin-1. (284 aa)
faddFas (tnfrsf6)-associated via death domain. (192 aa)
pak2aNon-specific serine/threonine protein kinase. (518 aa)
unc5bUnc-5 netrin receptor B. (940 aa)
rnf34bRing finger protein 34b. (384 aa)
rnf34aRing finger protein 34a. (363 aa)
birc6Baculoviral IAP repeat-containing 6. (4927 aa)
nf1aNeurofibromin 1a. (2759 aa)
cyldlCylindromatosis (turban tumor syndrome),-like; Belongs to the peptidase C19 family. (761 aa)
E7F279_DANRESi:ch73-248e21.1. (383 aa)
cyldaCylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (951 aa)
deptorDEP domain-containing MTOR-interacting protein. (407 aa)
tnfaip3Tumor necrosis factor, alpha-induced protein 3. (756 aa)
cflarbCASP8 and FADD-like apoptosis regulator b. (178 aa)
ENSDARP00000122182Si:dkey-95h12.2. (158 aa)
nf1bNeurofibromin 1b. (2759 aa)
eya3Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (617 aa)
ppp2r1baProtein phosphatase 2, regulatory subunit A, beta a. (589 aa)
LOC101885512Uncharacterized protein. (243 aa)
gfralGDNF family receptor alpha-like. (367 aa)
cyldbCylindromatosis (turban tumor syndrome), b. (694 aa)
skilbSKI-like proto-oncogene b. (624 aa)
zswim2Zinc finger, SWIM-type-containing 2. (589 aa)
g0s2Hypothetical LOC568476. (162 aa)
lgals3aGalectin. (332 aa)
scg2bSecretogranin II (chromogranin C), b. (583 aa)
rb1cc1RB1-inducible coiled-coil 1. (1622 aa)
zmynd11Zinc finger, MYND-type-containing 11. (640 aa)
ptprcProtein tyrosine phosphatase receptor type C. (1130 aa)
F1QYY8_DANRESi:dkeyp-97e7.9. (393 aa)
srcProto-oncogene tyrosine-protein kinase Src; Non-receptor protein tyrosine kinase which is activated following engagement of many different classes of cellular receptors including immune response receptors, integrins and other adhesion receptors, receptor protein tyrosine kinases, G protein-coupled receptors as well as cytokine receptors. Participates in signaling pathways that control a diverse spectrum of biological activities including gene transcription, immune response, cell adhesion, cell cycle progression, apoptosis, migration, and transformation. Due to functional redundancy bet [...] (534 aa)
sfrp2Secreted frizzled-related protein 2. (294 aa)
traf1TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (551 aa)
arAndrogen receptor. (868 aa)
pea15Proliferation and apoptosis adaptor protein 15. (130 aa)
zc3hc1Zinc finger, C3HC-type-containing 1. (492 aa)
fem1bFem-1 homolog b. (638 aa)
sgk3Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (486 aa)
gata1bGATA-binding protein 1b. (361 aa)
serpine1Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family. (392 aa)
cflaraCASP8 and FADD-like apoptosis regulator a; Belongs to the peptidase C14A family. (461 aa)
httHuntingtin. (3121 aa)
dedd1Death effector domain-containing 1. (369 aa)
zgc:171740Zgc:171740. (271 aa)
lgals3bGalectin. (252 aa)
itm2caIntegral membrane protein 2Ca. (260 aa)
itm2cbIntegral membrane protein 2Cb. (260 aa)
skilaSKI-like proto-oncogene a. (623 aa)
LOC794408Si:dkeyp-80c12.4. (687 aa)
map2k5Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily. (450 aa)
agtr2Angiotensin II receptor, type 2; Belongs to the G-protein coupled receptor 1 family. (360 aa)
rbck1RanBP-type and C3HC4-type zinc finger-containing protein 1. (515 aa)
pak2bNon-specific serine/threonine protein kinase. (537 aa)
traf2aTNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (575 aa)
faf1Fas (TNFRSF6)-associated factor 1. (675 aa)
atf3Activating transcription factor 3. (202 aa)
tnfaTumor necrosis factor a (TNF superfamily, member 2). (234 aa)
srpxSushi-repeat-containing protein X-linked. (448 aa)
gclmGlutamate-cysteine ligase, modifier subunit. (273 aa)
faimaFas apoptotic inhibitory molecule a. (179 aa)
agtAngiotensinogen; Belongs to the serpin family. (454 aa)
gclcGlutamate-cysteine ligase, catalytic subunit. (631 aa)
ppp2r1bbProtein phosphatase 2 (Formerly 2A), regulatory subunit A, beta isoform. (589 aa)
unm_sa808Un-named sa808. (281 aa)
fgbFibrinogen, B beta polypeptide. (485 aa)
itpripInositol 1,4,5-trisphosphate receptor-interacting protein; Enhances Ca(2+)-mediated inhibition of inositol 1,4,5- triphosphate receptor (ITPR) Ca(2+) release. Belongs to the ITPRIP family. (539 aa)
faimbFas apoptotic inhibitory molecule b. (180 aa)
psme3Proteasome activator subunit 3. (256 aa)
rfflRing finger and FYVE-like domain-containing E3 ubiquitin protein ligase. (346 aa)
gata1aGATA-binding protein 1a. (418 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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