(67 nodes) Large ribosomal subunit network (Danio rerio)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mrpl11	Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. (196 aa)
	mrpl51	39S ribosomal protein L51, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL51 family. (124 aa)
	mrpl47	Mitochondrial ribosomal protein L47. (249 aa)
	mrpl52	Mitochondrial ribosomal protein L52. (127 aa)
	rpl19	60S ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
	rpl26	ATPase H+ transporting V0 subunit e1. (145 aa)
	mrpl12	Mitochondrial ribosomal protein L12. (199 aa)
	zgc:171480	Zgc:171480. (133 aa)
	mrpl40	Mitochondrial ribosomal protein L40. (200 aa)
	mrpl3	Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (345 aa)
	mrpl33	Mitochondrial ribosomal protein L33. (65 aa)
	mrps30	Mitochondrial ribosomal protein S30. (420 aa)
	mrpl15	39S ribosomal protein L15, mitochondrial; Belongs to the universal ribosomal protein uL15 family. (296 aa)
	mrpl21	Mitochondrial ribosomal protein L21. (208 aa)
	ENSDARP00000155146	Uncharacterized protein. (81 aa)
	mrpl16	Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (254 aa)
	ccdc32	Coiled-coil domain-containing 32. (182 aa)
	MTERF4	Si:dkeyp-94h10.5. (316 aa)
	rpl35a	Ribosomal protein L35a. (110 aa)
	rpl31	Ribosomal protein L31. (123 aa)
	mrpl45	Mitochondrial ribosomal protein L45. (316 aa)
	mrpl34	Mitochondrial ribosomal protein L34. (121 aa)
	rpl9	Ribosomal protein L9. (192 aa)
	rpl10	60S ribosomal protein L10; Component of the large ribosomal subunit (Probable). Plays a role in the formation of actively translating ribosomes. Plays a role in the embryonic brain development. (215 aa)
	mrpl10	39S ribosomal protein L10, mitochondrial; Belongs to the universal ribosomal protein uL10 family. (252 aa)
	mrpl28	Mitochondrial ribosomal protein L28. (252 aa)
	mrpl23	39S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL23 family. (153 aa)
	mpv17l2	Mpv17-like protein 2; Required for the assembly and stability of the mitochondrial ribosome (By similarity). Is a positive regulator of mitochondrial protein synthesis (By similarity). (199 aa)
	mrpl13	Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. (179 aa)
	rpl35	60S ribosomal protein L35; Plays an essential role in early embryonic development. May act as a haploinsufficient tumor suppressor. Belongs to the universal ribosomal protein uL29 family. (123 aa)
	rpl27	60S ribosomal protein L27; Component of the large ribosomal subunit. (136 aa)
	rpl36a	60S ribosomal protein L36a. (106 aa)
	mrpl4	39S ribosomal protein L4, mitochondrial; Belongs to the universal ribosomal protein uL4 family. (302 aa)
	mrpl18	Mitochondrial ribosomal protein L18. (191 aa)
	mrpl32	Mitochondrial ribosomal protein L32. (174 aa)
	mrpl24	Probable 39S ribosomal protein L24, mitochondrial; Belongs to the universal ribosomal protein uL24 family. (216 aa)
	mrpl53	Mitochondrial ribosomal protein L53. (108 aa)
	rplp1	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa)
	rpl15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	rpl18a	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	mrpl27	Mitochondrial ribosomal protein L27. (148 aa)
	rpl30	Ribosomal protein L30. (117 aa)
	mrpl42	Mitochondrial ribosomal protein L42. (144 aa)
	mrpl58	Mitochondrial ribosomal protein L58. (193 aa)
	mrpl43	Mitochondrial ribosomal protein L43. (148 aa)
	mrpl20	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family. (149 aa)
	mrpl38	Mitochondrial ribosomal protein L38. (345 aa)
	MRPL49	Mitochondrial ribosomal protein L49. (176 aa)
	mrpl17	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (166 aa)
	mrpl54	39S ribosomal protein L54, mitochondrial. (135 aa)
	mrpl36	39S ribosomal protein L36, mitochondrial; Belongs to the bacterial ribosomal protein bL36 family. (116 aa)
	mrpl30	Mitochondrial ribosomal protein L30. (154 aa)
	rpl6	Ribosomal protein L6. (265 aa)
	mrpl14	39S ribosomal protein L14, mitochondrial; May form part of 2 intersubunit bridges in the assembled ribosome. Upon binding to MALSU1, intersubunit bridge formation is blocked, preventing ribosome formation and repressing translation. (141 aa)
	zcchc17	Zinc finger, CCHC domain-containing 17. (235 aa)
	mrpl2	Mitochondrial ribosomal protein L2. (294 aa)
	rpl32	Ribosomal protein L32. (135 aa)
	rpl4	Ribosomal protein L4. (375 aa)
	mrpl48	Mitochondrial ribosomal protein L48. (207 aa)
	mrpl35	Mitochondrial ribosomal protein L35. (188 aa)
	cenpq	Mitochondrial ribosomal protein L39. (342 aa)
	mrpl37	Mitochondrial ribosomal protein L37. (430 aa)
	mrpl22	Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family. (209 aa)
	rpl29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
	mrpl46	Mitochondrial ribosomal protein L46. (286 aa)
	mrpl19	Mitochondrial ribosomal protein L19. (281 aa)
	mrpl41	39S ribosomal protein L41, mitochondrial; Component of the mitochondrial ribosome large subunit. Also involved in apoptosis and cell cycle (By similarity). (135 aa)

Your Current Organism:

Danio rerio

NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSDARP00000155146	MRPL49	ENSDARP00000155146	ENSDARP00000099561	Uncharacterized protein.	Mitochondrial ribosomal protein L49.	0.734
ENSDARP00000155146	cenpq	ENSDARP00000155146	ENSDARP00000119574	Uncharacterized protein.	Mitochondrial ribosomal protein L39.	0.510
ENSDARP00000155146	mrpl10	ENSDARP00000155146	ENSDARP00000066302	Uncharacterized protein.	39S ribosomal protein L10, mitochondrial; Belongs to the universal ribosomal protein uL10 family.	0.487
ENSDARP00000155146	mrpl11	ENSDARP00000155146	ENSDARP00000016196	Uncharacterized protein.	Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	0.882
ENSDARP00000155146	mrpl12	ENSDARP00000155146	ENSDARP00000129769	Uncharacterized protein.	Mitochondrial ribosomal protein L12.	0.990
ENSDARP00000155146	mrpl13	ENSDARP00000155146	ENSDARP00000073936	Uncharacterized protein.	Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	0.958
ENSDARP00000155146	mrpl15	ENSDARP00000155146	ENSDARP00000133244	Uncharacterized protein.	39S ribosomal protein L15, mitochondrial; Belongs to the universal ribosomal protein uL15 family.	0.990
ENSDARP00000155146	mrpl16	ENSDARP00000155146	ENSDARP00000154973	Uncharacterized protein.	Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.900
ENSDARP00000155146	mrpl17	ENSDARP00000155146	ENSDARP00000098731	Uncharacterized protein.	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	0.990
ENSDARP00000155146	mrpl19	ENSDARP00000155146	ENSDARP00000008022	Uncharacterized protein.	Mitochondrial ribosomal protein L19.	0.987
ENSDARP00000155146	mrpl2	ENSDARP00000155146	ENSDARP00000085077	Uncharacterized protein.	Mitochondrial ribosomal protein L2.	0.958
ENSDARP00000155146	mrpl20	ENSDARP00000155146	ENSDARP00000111625	Uncharacterized protein.	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	0.986
ENSDARP00000155146	mrpl21	ENSDARP00000155146	ENSDARP00000130836	Uncharacterized protein.	Mitochondrial ribosomal protein L21.	0.989
ENSDARP00000155146	mrpl22	ENSDARP00000155146	ENSDARP00000146997	Uncharacterized protein.	Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.	0.958
ENSDARP00000155146	mrpl23	ENSDARP00000155146	ENSDARP00000067178	Uncharacterized protein.	39S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL23 family.	0.875
ENSDARP00000155146	mrpl24	ENSDARP00000155146	ENSDARP00000024527	Uncharacterized protein.	Probable 39S ribosomal protein L24, mitochondrial; Belongs to the universal ribosomal protein uL24 family.	0.958
ENSDARP00000155146	mrpl27	ENSDARP00000155146	ENSDARP00000043545	Uncharacterized protein.	Mitochondrial ribosomal protein L27.	0.985
ENSDARP00000155146	mrpl3	ENSDARP00000155146	ENSDARP00000141505	Uncharacterized protein.	Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.958
ENSDARP00000155146	mrpl30	ENSDARP00000155146	ENSDARP00000092761	Uncharacterized protein.	Mitochondrial ribosomal protein L30.	0.758
ENSDARP00000155146	mrpl32	ENSDARP00000155146	ENSDARP00000079717	Uncharacterized protein.	Mitochondrial ribosomal protein L32.	0.986

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