STRINGSTRING
psmb13a psmb13a psmb9a psmb9a psmb11a psmb11a psmb4 psmb4 psmb5 psmb5 psmb8a psmb8a psmb11b psmb11b psmb6 psmb6 psmb3 psmb3 psmb1 psmb1 psmb12 psmb12
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
psmb13aProteasome subunit beta. (281 aa)
psmb9aProteasome subunit beta. (218 aa)
psmb11aNovel protein similar to proteasomes. (375 aa)
psmb4Proteasome subunit beta; Belongs to the peptidase T1B family. (256 aa)
psmb5Proteasome subunit beta. (269 aa)
psmb8aProteasome subunit beta. (271 aa)
psmb11bProteasome 20S subunit beta 11b. (362 aa)
psmb6Proteasome subunit beta. (232 aa)
psmb3Proteasome subunit beta. (205 aa)
psmb1Proteasome subunit beta. (237 aa)
psmb12Proteasome subunit beta. (217 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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