STRINGSTRING
rps25 rps25 rps11b rps11b rps19 rps19 mcts1 mcts1 rps23 rps23 rps21 rps21 rps6 rps6 rps5 rps5 faub faub rps28 rps28 rps26l rps26l rps3a rps3a rps16 rps16 rps11 rps11 rps24 rps24 rps15 rps15 rps26 rps26 faua faua dhx29 dhx29 rps7 rps7 rps29 rps29 rpsa rpsa rps2 rps2 rps13 rps13 rps17 rps17 zgc:114188 zgc:114188
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (124 aa)
rps11bSi:dkey-159f12.2. (172 aa)
rps19Ribosomal protein S19. (146 aa)
mcts1Malignant T-cell-amplified sequence 1; Plays a role as translation enhancer and involved in cell cycle regulation. (181 aa)
rps23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
rps2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (81 aa)
rps640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
rps5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (204 aa)
faub40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
rps2840S ribosomal protein S28; Belongs to the eukaryotic ribosomal protein eS28 family. (69 aa)
rps26l40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
rps3a40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (267 aa)
rps16Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
rps11Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (159 aa)
rps2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
rps15Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
faua40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
dhx29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1379 aa)
rps740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
rps29Ribosomal protein S29. (56 aa)
rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (308 aa)
rps2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (280 aa)
rps13Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
rps17Ribosomal protein S17. (134 aa)
zgc:114188Zgc:114188. (134 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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