STRINGSTRING
LOC100004951 LOC100004951 nrsn1 nrsn1 snphb snphb UNC5C UNC5C dpysl5a dpysl5a fgf13a fgf13a exoc4 exoc4 C13H9orf72 C13H9orf72 l1cama l1cama fgf13b fgf13b syap1 syap1 elavl3 elavl3 myo9ab myo9ab myo9aa myo9aa rufy3 rufy3 nrgna nrgna shtn1 shtn1 gpm6aa gpm6aa fgf14 fgf14 otx5 otx5 crmp1 crmp1 dpysl3 dpysl3 dpysl5b dpysl5b basp1 basp1 nrsn1l nrsn1l myo9b myo9b myo10l3 myo10l3 si:ch211-1o7.3 si:ch211-1o7.3 abitram abitram stmn2a stmn2a als2a als2a LOC100332721 LOC100332721 dpys dpys otx2b otx2b exoc8 exoc8 unc5c unc5c stmn2b stmn2b zfyve27 zfyve27 fbrsl1 fbrsl1 myo10 myo10 LOC101882811 LOC101882811 flrt3 flrt3 l1camb l1camb myo15ab myo15ab als2b als2b setx setx gpm6ab gpm6ab myo15aa myo15aa myo10l1 myo10l1 myo15b myo15b ENSDARP00000129086 ENSDARP00000129086 LAMP5 LAMP5 auts2b auts2b gap43 gap43 dcc dcc neo1a neo1a cib1 cib1 ENSDARP00000142109 ENSDARP00000142109 MYO9B MYO9B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100004951Fibronectin type-III domain-containing protein. (626 aa)
nrsn1Neurensin 1. (198 aa)
snphbSyntaphilin b. (685 aa)
UNC5CSi:ch73-72b7.1. (813 aa)
dpysl5aDihydropyrimidinase-like 5a. (590 aa)
fgf13aFibroblast growth factor; Belongs to the heparin-binding growth factors family. (246 aa)
exoc4Exocyst complex component 4. (968 aa)
C13H9orf72Zgc:100846. (462 aa)
l1camaNeural cell adhesion molecule L1.2; Cell adhesion molecule with an important role in the development of the nervous system. Involved in neuron-neuron adhesion, neurite fasciculation, outgrowth of neurites, etc. Binds to axonin on neurons (By similarity); Belongs to the immunoglobulin superfamily. L1/neurofascin/NgCAM family. (1271 aa)
fgf13bFibroblast growth factor; Belongs to the heparin-binding growth factors family. (257 aa)
syap1Synapse-associated protein 1. (334 aa)
elavl3ELAV-like protein; Belongs to the RRM elav family. (359 aa)
myo9abUnconventional myosin-IXAb; Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Regulates Rho by stimulating it's GTPase activity in neurons (By similarity). Required for the regulation of neurite branching and motor neuron axon guidance. (2286 aa)
myo9aaUnconventional myosin-IXAa; Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Regulates Rho by stimulating it's GTPase activity in neurons (By similarity). Required for the regulation of neurite branching and motor neuron axon guidance. (2522 aa)
rufy3RUN and FYVE domain-containing 3. (470 aa)
nrgnaNeurogranin (protein kinase C substrate, RC3) a. (60 aa)
shtn1Shootin-1; Involved in the generation of internal asymmetric signals required for neuronal polarization and neurite outgrowth. Belongs to the shootin family. (544 aa)
gpm6aaGlycoprotein M6Aa. (278 aa)
fgf14Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (248 aa)
otx5Orthodenticle homolog 5. (289 aa)
crmp1Collapsin response mediator protein 1. (575 aa)
dpysl3Dihydropyrimidinase-related protein 3; Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in axon guidance, neuronal growth cone collapse and cell migration (By similarity). Belongs to the metallo-dependent hydrolases superfamily. Hydantoinase/dihydropyrimidinase family. (567 aa)
dpysl5bDihydropyrimidinase-like 5b. (568 aa)
basp1Brain acid soluble protein 1 homolog. (197 aa)
nrsn1lNeurensin 1-like. (190 aa)
myo9bMyosin IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1974 aa)
myo10l3Myosin X,-like 3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1537 aa)
si:ch211-1o7.3Si:ch211-1o7.3. (561 aa)
abitramProtein Abitram; May regulate actin polymerization, filopodia dynamics and arborization of neurons; Belongs to the ABITRAM family. (177 aa)
stmn2aStathmin; Belongs to the stathmin family. (180 aa)
als2aAlsin Rho guanine nucleotide exchange factor ALS2 a. (1662 aa)
LOC100332721Neogenin 1b. (1413 aa)
dpysDihydropyrimidinase. (500 aa)
otx2bHomeobox protein OTX2; May play a role in very early embryogenesis, gastrulation, and the development and subdivision of the diencephalon and the midbrain. (289 aa)
exoc8Exocyst complex component 8. (684 aa)
unc5cUnc-5 netrin receptor C. (746 aa)
stmn2bStathmin; Belongs to the stathmin family. (180 aa)
zfyve27Zinc finger, FYVE domain-containing 27. (409 aa)
fbrsl1Fibrosin-like 1. (867 aa)
myo10Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2069 aa)
LOC101882811Syntaphilin a. (253 aa)
flrt3Fibronectin leucine-rich transmembrane 3. (649 aa)
l1cambNeural cell adhesion molecule L1.1; Cell adhesion molecule with an important role in the development of the nervous system. Involved in neuron-neuron adhesion, neurite fasciculation, outgrowth of neurites, etc. Binds to axonin on neurons (By similarity); Belongs to the immunoglobulin superfamily. L1/neurofascin/NgCAM family. (1332 aa)
myo15abMyosin XVAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2375 aa)
als2bAlsin Rho guanine nucleotide exchange factor ALS2 b. (1681 aa)
setxSenataxin. (2368 aa)
gpm6abGlycoprotein M6Ab. (292 aa)
myo15aaMyosin XVAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (4115 aa)
myo10l1Myosin X,-like 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2041 aa)
myo15bMyosin XVB. (1612 aa)
ENSDARP00000129086Neogenin 1b. (132 aa)
LAMP5Lysosome-associated membrane glycoprotein 5; Plays a role in short-term synaptic plasticity in a subset of GABAergic neurons in the brain. (213 aa)
auts2bActivator of transcription and developmental regulator AUTS2 b. (748 aa)
gap43Growth-associated protein 43. (194 aa)
dccDCC netrin 1 receptor. (1200 aa)
neo1aNeogenin 1a. (1428 aa)
cib1Calcium and integrin-binding 1 (calmyrin). (188 aa)
ENSDARP00000142109Si:dkey-280e21.3. (652 aa)
MYO9BSi:zfos-588f8.1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2085 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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