STRINGSTRING
apobb.2 apobb.2 safb safb vldlr vldlr F1QCQ0_DANRE F1QCQ0_DANRE ldlra ldlra apoeb apoeb apoba apoba LOC107980443 LOC107980443 ENSDARP00000105560 ENSDARP00000105560 lpl lpl F1Q8F3_DANRE F1Q8F3_DANRE F1Q6R5_DANRE F1Q6R5_DANRE LOC100536757 LOC100536757 apobb.1 apobb.1 apoc1 apoc1 ldlrb ldlrb X1WH15_DANRE X1WH15_DANRE pcyox1 pcyox1 ENSDARP00000133711 ENSDARP00000133711 LOC101884800 LOC101884800 X1WBM3_DANRE X1WBM3_DANRE ENSDARP00000142303 ENSDARP00000142303 lrp8 lrp8 ENSDARP00000152115 ENSDARP00000152115 LOC100331214 LOC100331214 pcyox1l pcyox1l
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
apobb.2Apolipoprotein Bb, tandem duplicate 2. (2534 aa)
safbScaffold attachment factor B. (855 aa)
vldlrVery low density lipoprotein receptor. (866 aa)
F1QCQ0_DANRESi:ch211-285c6.3. (543 aa)
ldlraLow density lipoprotein receptor a. (911 aa)
apoebApolipoprotein Eb; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. Belongs to the apolipoprotein A1/A4/E family. (281 aa)
apobaApolipoprotein Ba. (4418 aa)
LOC107980443Si:dkey-192d15.2. (575 aa)
ENSDARP00000105560Si:ch211-285c6.2. (586 aa)
lplLipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans. (511 aa)
F1Q8F3_DANRESi:dkey-258f14.7. (235 aa)
F1Q6R5_DANRESi:dkey-258f14.2. (114 aa)
LOC100536757Si:dkey-258f14.3. (488 aa)
apobb.1Apolipoprotein Bb, tandem duplicate 1. (3730 aa)
apoc1Apolipoprotein C-I. (85 aa)
ldlrbLow density lipoprotein receptor b. (788 aa)
X1WH15_DANRESi:dkey-125e8.3. (248 aa)
pcyox1Prenylcysteine oxidase 1. (509 aa)
ENSDARP00000133711Si:dkey-192d15.1. (553 aa)
LOC101884800PLAT domain-containing protein. (530 aa)
X1WBM3_DANRESi:ch211-217i17.1. (583 aa)
ENSDARP00000142303Si:ch73-122k23.1. (472 aa)
lrp8Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor. (984 aa)
ENSDARP00000152115Uncharacterized protein. (109 aa)
LOC100331214PLAT domain-containing protein. (502 aa)
pcyox1lPrenylcysteine oxidase 1-like. (401 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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