STRINGSTRING
ENSDARP00000105560 ENSDARP00000105560 apoa4b.2 apoa4b.2 lipca lipca LOC107980443 LOC107980443 apoeb apoeb cetp cetp F1QCQ0_DANRE F1QCQ0_DANRE apoa1a apoa1a apoa1b apoa1b ENSDARP00000142303 ENSDARP00000142303 X1WBM3_DANRE X1WBM3_DANRE ENSDARP00000133711 ENSDARP00000133711 lcat lcat pltp pltp X1WH15_DANRE X1WH15_DANRE apof apof apom apom apoc1 apoc1 si:dkey-7f3.14 si:dkey-7f3.14 apoa4b.3 apoa4b.3 apoc2 apoc2 apoa4b.1 apoa4b.1 LOC110438373 LOC110438373 zgc:162608 zgc:162608
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSDARP00000105560Si:ch211-285c6.2. (586 aa)
apoa4b.2Apolipoprotein A-IV b, tandem duplicate 2. (255 aa)
lipcaLipase, hepatic a. (514 aa)
LOC107980443Si:dkey-192d15.2. (575 aa)
apoebApolipoprotein Eb; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. Belongs to the apolipoprotein A1/A4/E family. (281 aa)
cetpCholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family. (493 aa)
F1QCQ0_DANRESi:ch211-285c6.3. (543 aa)
apoa1aProapolipoprotein A-I; Participates in the reverse transport of cholesterol from tissues to the liver for excretion by promoting cholesterol efflux from tissues and by acting as a cofactor for the lecithin cholesterol acyltransferase (LCAT). (262 aa)
apoa1bApolipoprotein A-Ib. (257 aa)
ENSDARP00000142303Si:ch73-122k23.1. (472 aa)
X1WBM3_DANRESi:ch211-217i17.1. (583 aa)
ENSDARP00000133711Si:dkey-192d15.1. (553 aa)
lcatLecithin-cholesterol acyltransferase. (425 aa)
pltpPhospholipid transfer protein. (486 aa)
X1WH15_DANRESi:dkey-125e8.3. (248 aa)
apofApolipoprotein F. (392 aa)
apomApolipoprotein M. (215 aa)
apoc1Apolipoprotein C-I. (85 aa)
si:dkey-7f3.14Si:dkey-7f3.14. (136 aa)
apoa4b.3Apolipoprotein A-IV b, tandem duplicate 2. (255 aa)
apoc2Apolipoprotein C-II. (100 aa)
apoa4b.1Apolipoprotein A-IV b, tandem duplicate 1. (255 aa)
LOC110438373Lipase, hepatic b. (326 aa)
zgc:162608Zgc:162608. (302 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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