STRINGSTRING
tgfb1a tgfb1a LOC108179061 LOC108179061 tgfb1b tgfb1b hp hp cfhl5 cfhl5 c1r c1r wu:fd46c06 wu:fd46c06 c1s c1s f13b f13b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tgfb1aTransforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
LOC108179061SIN3-HDAC complex-associated factor,-like. (401 aa)
tgfb1bTransforming growth factor beta; Belongs to the TGF-beta family. (379 aa)
hpHaptoglobin. (308 aa)
cfhl5Complement factor H-like 5. (367 aa)
c1rComplement component 1, r subcomponent; Belongs to the peptidase S1 family. (662 aa)
wu:fd46c06Wu:fd46c06; Belongs to the peptidase S1 family. (458 aa)
c1sComplement component 1, s subcomponent. (375 aa)
f13bCoagulation factor XIII, B polypeptide. (222 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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