STRINGSTRING
stab2 stab2 cd44b cd44b vcana vcana ncanb ncanb hapln1b hapln1b lyve1b lyve1b acana acana tnfaip6 tnfaip6 stab1 stab1 lyve1a lyve1a hapln1a hapln1a cd44a cd44a hapln4 hapln4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
stab2Stabilin 2. (2543 aa)
cd44bCD44 molecule (Indian blood group) b. (405 aa)
vcanaVersican a. (635 aa)
ncanbNeurocan b. (1254 aa)
hapln1bHyaluronan and proteoglycan link protein 1b. (353 aa)
lyve1bLymphatic vessel endothelial hyaluronic receptor 1b. (355 aa)
acanaAggrecan a. (1547 aa)
tnfaip6Tumor necrosis factor, alpha-induced protein 6. (271 aa)
stab1Stabilin 1. (2553 aa)
lyve1aLymphatic vessel endothelial hyaluronic receptor 1a. (328 aa)
hapln1aHyaluronan and proteoglycan link protein 1a. (336 aa)
cd44aCD44 molecule (Indian blood group) a. (392 aa)
hapln4Hyaluronan and proteoglycan link protein 4. (344 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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