STRINGSTRING
mrtfbb mrtfbb sf3b2 sf3b2 hnrnpua hnrnpua acin1b acin1b eri1 eri1 pias4a pias4a xrcc6 xrcc6 hnrnpub hnrnpub sltm sltm ccar1 ccar1 E9QBM3_DANRE E9QBM3_DANRE pias2 pias2 pias1a pias1a pias4b pias4b mrtfba mrtfba mrtfab mrtfab
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mrtfbbMyocardin-related transcription factor Bb. (903 aa)
sf3b2Splicing factor 3b, subunit 2. (825 aa)
hnrnpuaHeterogeneous nuclear ribonucleoprotein Ua. (760 aa)
acin1bApoptotic chromatin condensation inducer 1b. (1259 aa)
eri1Exoribonuclease 1. (337 aa)
pias4aE3 SUMO-protein ligase PIAS4-A; Functions as an E3-type small ubiquitin-like modifier (SUMO) ligase (By similarity). May play a role as a transcriptional coregulator in various cellular pathways (By similarity). Negatively regulates induction of interferon phi 1 (ifnphi1) mediated by mavs and ticam1/trif. Also inhibits ifnphi1-mediated activation of the interferon-stimulated genes (ISGs) pkz and cd40, and to a lesser extent rsad2 and isg15. May inhibit ticam1/trif-mediated activation of NF-kappa-B. (508 aa)
xrcc6X-ray repair-complementing defective repair in Chinese hamster cells 6. (610 aa)
hnrnpubHeterogeneous nuclear ribonucleoprotein Ub. (796 aa)
sltmSAFB-like, transcription modulator. (983 aa)
ccar1Cell division cycle and apoptosis regulator 1. (1194 aa)
E9QBM3_DANRESi:ch211-107m4.1. (716 aa)
pias2Protein inhibitor of-activated STAT, 2. (623 aa)
pias1aProtein inhibitor of-activated STAT, 1a. (651 aa)
pias4bProtein inhibitor of-activated STAT, 4b. (485 aa)
mrtfbaMyocardin-related transcription factor Ba. (986 aa)
mrtfabMyocardin-related transcription factor Ab. (1200 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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