STRINGSTRING
gabarapb gabarapb map1lc3c map1lc3c gabarapl2 gabarapl2 map1lc3a map1lc3a gabarapa gabarapa zgc:92606 zgc:92606 map1lc3b map1lc3b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gabarapbGABA(A) receptor-associated protein b. (152 aa)
map1lc3cMicrotubule-associated protein 1 light chain 3 gamma. (128 aa)
gabarapl2GABA(A) receptor-associated protein-like 2. (117 aa)
map1lc3aMicrotubule-associated protein 1 light chain 3 alpha. (121 aa)
gabarapaGABA(A) receptor-associated protein a. (122 aa)
zgc:92606Zgc:92606. (117 aa)
map1lc3bMicrotubule-associated protein 1 light chain 3 beta. (122 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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