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ddx42 ddx42 ddx3xa ddx3xa ddx23 ddx23 ddx39aa ddx39aa ddx1 ddx1 ddx39ab ddx39ab eif4a1b eif4a1b ddx55 ddx55 ddx56 ddx56 ddx39b ddx39b ddx5 ddx5 eif4a1a eif4a1a ddx43 ddx43 eif4a2 eif4a2 DDX17 DDX17 ddx31 ddx31 ddx10 ddx10 ddx61 ddx61 ddx52 ddx52 ddx46 ddx46 eif4a3 eif4a3 ddx54 ddx54 ddx20 ddx20 ddx6 ddx6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ddx42DEAD (Asp-Glu-Ala-Asp) box helicase 42. (908 aa)
ddx3xaDEAD-box helicase 3 X-linked a; Belongs to the DEAD box helicase family. (709 aa)
ddx23DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (807 aa)
ddx39aaDEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa. (427 aa)
ddx1DEAD (Asp-Glu-Ala-Asp) box helicase 1. (740 aa)
ddx39abDEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab. (427 aa)
eif4a1bEukaryotic translation initiation factor 4A, isoform 1B; Belongs to the DEAD box helicase family. (406 aa)
ddx55ATP-dependent RNA helicase DDX55; Probable ATP-binding RNA helicase. Plays an essential role in early embryonic development; Belongs to the DEAD box helicase family. DDX55/SPB4 subfamily. (593 aa)
ddx56DEAD (Asp-Glu-Ala-Asp) box helicase 56. (557 aa)
ddx39bDEAD (Asp-Glu-Ala-Asp) box polypeptide 39B. (435 aa)
ddx5DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (617 aa)
eif4a1aEukaryotic translation initiation factor 4A, isoform 1A. (406 aa)
ddx43DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family. (719 aa)
eif4a2Eukaryotic translation initiation factor 4A, isoform 2; Belongs to the DEAD box helicase family. (411 aa)
DDX17Si:dkey-156n14.5; Belongs to the DEAD box helicase family. (671 aa)
ddx31RNA helicase. (739 aa)
ddx10RNA helicase. (864 aa)
ddx61DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family. (483 aa)
ddx52DEAD (Asp-Glu-Ala-Asp) box polypeptide 52. (608 aa)
ddx46Probable ATP-dependent RNA helicase DDX46; Plays an essential role in splicing, either prior to, or during A complex formation; Belongs to the DEAD box helicase family. DDX46/PRP5 subfamily. (1018 aa)
eif4a3Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...] (406 aa)
ddx54ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (862 aa)
ddx20Probable ATP-dependent RNA helicase DDX20; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs. Most spliceosomal snRNPs contain a common set of Sm proteins that assemble in a heptameric protein ring on the Sm site of the small nuclear RNA to form the core snRNP. In the cytosol, the Sm proteins are trapped in an inactive complex. The SMN complex triggers the assembly of core snRNPs and their transport to the nucleus. May also pla [...] (811 aa)
ddx6DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family. (484 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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