STRINGSTRING
psmb4 psmb4 psmb9a psmb9a psmb13a psmb13a psmb12 psmb12 psmb1 psmb1 psmb3 psmb3 psmb2 psmb2 psmb10 psmb10 psmb8a psmb8a psmb7 psmb7 psmb11a psmb11a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
psmb4Proteasome subunit beta; Belongs to the peptidase T1B family. (256 aa)
psmb9aProteasome subunit beta. (218 aa)
psmb13aProteasome subunit beta. (281 aa)
psmb12Proteasome subunit beta. (217 aa)
psmb1Proteasome subunit beta. (237 aa)
psmb3Proteasome subunit beta. (205 aa)
psmb2Proteasome subunit beta. (199 aa)
psmb10Proteasome subunit beta. (276 aa)
psmb8aProteasome subunit beta. (271 aa)
psmb7Proteasome subunit beta. (277 aa)
psmb11aNovel protein similar to proteasomes. (375 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.