STRINGSTRING
avil avil sec24a sec24a svilc svilc sec24b sec24b scinlb scinlb twf2 twf2 vil1 vil1 vill vill gsnb gsnb scin scin gmfb gmfb cotl1 cotl1 sec24d sec24d dbnlb dbnlb gsna gsna dbnla dbnla cfl1 cfl1 twf1b twf1b cfl2 cfl2 cfl1l cfl1l sec24c sec24c capgb capgb sec23a sec23a svila svila
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
avilZgc:136857. (811 aa)
sec24aSEC24 homolog A, COPII coat complex component. (1096 aa)
svilcSupervillin c. (1531 aa)
sec24bSEC24 homolog B, COPII coat complex component. (1184 aa)
scinlbScinderin-like b. (720 aa)
twf2Twinfilin-2; Actin-binding protein involved in motile and morphological processes. Inhibits actin polymerization, likely by sequestering G- actin (By similarity). (347 aa)
vil1Villin 1. (834 aa)
villVillin-like. (850 aa)
gsnbGelsolin b. (728 aa)
scinScinderin. (733 aa)
gmfbGlia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily. (142 aa)
cotl1Coactosin-like F-actin-binding protein 1. (142 aa)
sec24dSEC24 homolog D, COPII coat complex component. (1030 aa)
dbnlbDrebrin-like b. (476 aa)
gsnaGelsolin a. (729 aa)
dbnlaDrebrin-like a. (496 aa)
cfl1Muscle cofilin 2; Belongs to the actin-binding proteins ADF family. (165 aa)
twf1bTwinfilin, actin-binding protein, homolog 1b. (349 aa)
cfl2Cofilin 2 (Muscle); Belongs to the actin-binding proteins ADF family. (166 aa)
cfl1lCofilin 1 (non-muscle),-like; Belongs to the actin-binding proteins ADF family. (163 aa)
sec24cSEC24 homolog C, COPII coat complex component. (1248 aa)
capgbCapping protein (actin filament), gelsolin-like b. (345 aa)
sec23aProtein transport protein Sec23A; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules for their transport to the Golgi complex. Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)
svilaSupervillin a. (1763 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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