STRINGSTRING
dtnba dtnba dmd dmd tada2b tada2b kcmf1 kcmf1 dytn dytn zzz3 zzz3 dtnbb dtnbb sqstm1 sqstm1 mib1 mib1 drp2 drp2 crebbpa crebbpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dtnbaDystrobrevin. (589 aa)
dmdDystrophin. (594 aa)
tada2bTranscriptional adapter 2-beta; Transcriptional coactivator. (486 aa)
kcmf1E3 ubiquitin-protein ligase KCMF1; Has intrinsic E3 ubiquitin ligase activity and promotes ubiquitination; Belongs to the KCMF1 family. (383 aa)
dytnDystrotelin. (648 aa)
zzz3Zinc finger, ZZ-type-containing 3. (871 aa)
dtnbbDystrobrevin. (568 aa)
sqstm1Sequestosome 1. (452 aa)
mib1E3 ubiquitin-protein ligase mib1; E3 ubiquitin-protein ligase that mediates ubiquitination of Delta receptors, which act as ligands of Notch proteins. Positively regulates the Delta-mediated Notch signaling by ubiquitinating the intracellular domain of Delta, leading to endocytosis of Delta receptors. It thereby participates in many processes regulated by the Notch signaling pathway, such as midline cell fate specification prior to germ layer formation, patterning of sensory cell differentiation in the ear, neurogenesis of the hindbrain and commitment to a secretory fate in the intesti [...] (1041 aa)
drp2Dystrophin-related protein 2. (866 aa)
crebbpaCREB-binding protein a. (2349 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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