STRINGSTRING
emid1 emid1 col17a1a col17a1a col6a3 col6a3 Q1LYN9_DANRE Q1LYN9_DANRE gldn gldn col11a2 col11a2 c1ql1 c1ql1 col16a1 col16a1 scara5 scara5 col4a3 col4a3 X1WCX6_DANRE X1WCX6_DANRE col7a1 col7a1 col12a1a col12a1a col4a4 col4a4 col8a1b col8a1b col10a1b col10a1b col28a1b col28a1b ENSDARP00000133510 ENSDARP00000133510 col27a1b col27a1b col4a2 col4a2 ENSDARP00000136675 ENSDARP00000136675 col5a3b col5a3b col18a1b col18a1b COLEC10 COLEC10 col22a1 col22a1 col2a1b col2a1b col7a1l col7a1l col5a3a col5a3a c1qtnf2 c1qtnf2 col28a2b col28a2b marco marco LOC100535278 LOC100535278 LOC101886266 LOC101886266 col18a1a col18a1a col11a1a col11a1a col1a1b col1a1b col1a1a col1a1a col12a1b col12a1b c1qtnf6b c1qtnf6b colec11 colec11 col14a1a col14a1a colq colq c1ql3a c1ql3a scara3 scara3 col24a1 col24a1 col5a2b col5a2b col21a1 col21a1 hbl4 hbl4 col9a2 col9a2 c1ql3b c1ql3b col11a1b col11a1b col9a3 col9a3 c1qb c1qb col4a5 col4a5 col4a1 col4a1 LOC101886389 LOC101886389 otol1b otol1b Q1LYI5_DANRE Q1LYI5_DANRE colec12 colec12 col6a2 col6a2 col15a1b col15a1b col10a1a col10a1a mbl2 mbl2 col2a1a col2a1a col8a1a col8a1a zmp:0000000760 zmp:0000000760 emilin1b emilin1b col9a1a col9a1a col28a2a col28a2a wu:fc38h03 wu:fc38h03 col28a1a col28a1a col6a4a col6a4a col6a1 col6a1 c1qtnf7 c1qtnf7 col4a6 col4a6 emilin1a emilin1a ccbe1 ccbe1 hbl1 hbl1 c1qtnf9 c1qtnf9 col8a2 col8a2 cthrc1a cthrc1a otol1a otol1a zgc:113232 zgc:113232 si:dkey-61l1.4 si:dkey-61l1.4 col1a2 col1a2 hbl2 hbl2 col19a1-2 col19a1-2 si:dkey-21p1.3 si:dkey-21p1.3 col5a1 col5a1 col17a1b col17a1b col9a1b col9a1b col5a2a col5a2a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
emid1EMI domain-containing 1. (447 aa)
col17a1aCollagen, type XVII, alpha 1a. (1408 aa)
col6a3Collagen, type VI, alpha 3. (3733 aa)
Q1LYN9_DANRESi:dkey-117n7.4. (531 aa)
gldnGliomedin. (564 aa)
col11a2Collagen, type XI, alpha 2. (1803 aa)
c1ql1Complement component 1, q subcomponent-like 3b. (298 aa)
col16a1Collagen, type XVI, alpha 1. (1580 aa)
scara5Scavenger receptor class A member 5; Ferritin receptor that mediates non-transferrin-dependent delivery of iron. Mediates cellular uptake of ferritin-bound iron by stimulating ferritin endocytosis from the cell surface with consequent iron delivery within the cell. Delivery of iron to cells by ferritin is required for the development of specific cell types, suggesting the existence of cell type-specific mechanisms of iron traffic in organogenesis, which alternatively utilize transferrin or non- transferrin iron delivery pathways. (499 aa)
col4a3Collagen, type IV, alpha 3. (1684 aa)
X1WCX6_DANRESi:ch211-196i2.1. (1573 aa)
col7a1Collagen, type VII, alpha 1. (3093 aa)
col12a1aCollagen, type XII, alpha 1a. (2975 aa)
col4a4Collagen, type IV, alpha 4. (1670 aa)
col8a1bCollagen, type VIII, alpha 1b. (733 aa)
col10a1bCollagen, type X, alpha 1b. (659 aa)
col28a1bCollagen, type XXVIII, alpha 1b. (1109 aa)
ENSDARP00000133510Uncharacterized protein. (474 aa)
col27a1bCollagen alpha-1(XXVII) chain B. (1330 aa)
col4a2Collagen, type IV, alpha 2. (1669 aa)
ENSDARP00000136675Si:dkeyp-44a8.4. (449 aa)
col5a3bCollagen, type V, alpha 3b. (1723 aa)
col18a1bCollagen type XVIII alpha 1 chain b. (867 aa)
COLEC10Si:ch211-93i7.4. (271 aa)
col22a1Collagen, type XXII, alpha 1. (1622 aa)
col2a1bCollagen, type II, alpha 1b. (1344 aa)
col7a1lCollagen type VII alpha 1-like. (2302 aa)
col5a3aCollagen, type V, alpha 3a. (1887 aa)
c1qtnf2C1q and TNF-related 2. (292 aa)
col28a2bCollagen, type XXVIII, alpha 2b. (1142 aa)
marcoMacrophage receptor with collagenous structure. (450 aa)
LOC100535278Si:ch211-62a1.3. (1771 aa)
LOC101886266Si:ch211-160j14.3. (416 aa)
col18a1aCollagen type XVIII alpha 1 chain a. (1383 aa)
col11a1aCollagen, type XI, alpha 1a. (1813 aa)
col1a1bCollagen, type I, alpha 1b. (1449 aa)
col1a1aCollagen, type I, alpha 1a. (1447 aa)
col12a1bCollagen, type XII, alpha 1b. (3643 aa)
c1qtnf6bC1q and TNF-related 6b. (244 aa)
colec11Collectin-11; Lectin that plays a role in innate immunity, apoptosis and embryogenesis. Calcium-dependent lectin that binds self and non-self glycoproteins presenting high mannose oligosaccharides with at least one terminal alpha-1,2-linked mannose epitope. Primarily recognizes the terminal disaccharide of the glycan. Also recognizes a subset of fucosylated glycans and lipopolysaccharides. Plays a role in innate immunity through its ability to bind non-self sugars presented by microorganisms and to activate the complement through the recruitment of MAPS1. Also plays a role in apoptosis [...] (271 aa)
col14a1aCollagen, type XIV, alpha 1a. (1864 aa)
colqCollagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase. (455 aa)
c1ql3aComplement component 1, q subcomponent-like 3a. (267 aa)
scara3Scavenger receptor class A, member 3. (586 aa)
col24a1LAM_G_DOMAIN domain-containing protein. (740 aa)
col5a2bCollagen, type V, alpha 2b. (1499 aa)
col21a1Collagen, type XXI, alpha 1. (717 aa)
hbl4Hexose-binding lectin 4. (245 aa)
col9a2Procollagen, type IX, alpha 2. (691 aa)
c1ql3bComplement component 1, q subcomponent-like 3b. (246 aa)
col11a1bCollagen, type XI, alpha 1b. (1815 aa)
col9a3Collagen, type IX, alpha 3. (679 aa)
c1qbComplement component 1, q subcomponent, B chain. (242 aa)
col4a5Collagen, type IV, alpha 5 (Alport syndrome). (1679 aa)
col4a1Collagen, type IV, alpha 1. (1583 aa)
LOC101886389C1q domain-containing protein. (469 aa)
otol1bOtolin 1b. (494 aa)
Q1LYI5_DANRESi:ch211-106n13.3. (873 aa)
colec12Collectin-12; Scavenger receptor that displays several functions associated with host defense. Binds to carbohydrates (By similarity). (720 aa)
col6a2Collagen, type VI, alpha 2. (1015 aa)
col15a1bCollagen, type XV, alpha 1b. (1245 aa)
col10a1aCollagen, type X, alpha 1a. (655 aa)
mbl2Mannose-binding lectin 2. (251 aa)
col2a1aCollagen, type II, alpha 1a. (1491 aa)
col8a1aCollagen, type VIII, alpha 1a. (711 aa)
zmp:0000000760Zmp:0000000760. (780 aa)
emilin1bElastin microfibril interfacer 1b. (1059 aa)
col9a1aCollagen, type IX, alpha 1a. (687 aa)
col28a2aCollagen, type XXVIII, alpha 2a. (1208 aa)
wu:fc38h03Wu:fc38h03. (411 aa)
col28a1aCollagen, type XXVIII, alpha 1a. (1170 aa)
col6a4aCollagen, type VI, alpha 4a. (2543 aa)
col6a1Collagen, type VI, alpha 1. (1007 aa)
c1qtnf7C1q and TNF-related 7. (286 aa)
col4a6Collagen, type IV, alpha 6. (1714 aa)
emilin1aElastin microfibril interfacer 1a. (1014 aa)
ccbe1Collagen and calcium-binding EGF domain-containing protein 1; Required for lymphangioblast budding and angiogenic sprouting from venous endothelium during embryogenesis. Necessary for lymphangiogenesis, but is probably not part of either the vegfc-vegfr3 signaling or sox18-prox1 transcriptional pathways. Belongs to the CCBE1 family. (401 aa)
hbl1Zmp:0000000729. (254 aa)
c1qtnf9C1q and TNF-related 9. (339 aa)
col8a2Collagen, type VIII, alpha 2. (686 aa)
cthrc1aCollagen triple helix repeat-containing 1a. (232 aa)
otol1aOtolin-1-A; Collagen-like protein, which provides an organic scaffold for otoliths onto the sensory epithelium of the inner ear. Acts as a scaffold for biomineralization by sequestering calcium ; Belongs to the OTOL1 family. (489 aa)
zgc:113232Zgc:113232. (637 aa)
si:dkey-61l1.4Si:dkey-61l1.4. (1194 aa)
col1a2Collagen, type I, alpha 2. (1352 aa)
hbl2Hexose-binding lectin 2. (253 aa)
col19a1-2Collagen, type XIX, alpha 1. (617 aa)
si:dkey-21p1.3Si:dkey-21p1.3. (1125 aa)
col5a1Procollagen, type V, alpha 1. (2011 aa)
col17a1bCollagen, type XVII, alpha 1b. (1368 aa)
col9a1bCollagen, type IX, alpha 1b. (681 aa)
col5a2aCollagen, type V, alpha 2a. (1521 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.