STRINGSTRING
spock1 spock1 spock2 spock2 sparc sparc sparcl1 sparcl1 smoc2 smoc2 smoc1 smoc1 spock3 spock3 sparcl2 sparcl2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
spock1SPARC (osteonectin), cwcv and kazal-like domains proteoglycan 1. (454 aa)
spock2SPARC (osteonectin), cwcv and kazal-like domains proteoglycan 2. (419 aa)
sparcSecreted protein, acidic, cysteine-rich (osteonectin). (291 aa)
sparcl1Secreted acidic cysteine rich glycoprotein-like. (606 aa)
smoc2SPARC-related modular calcium-binding 2. (437 aa)
smoc1SPARC-related modular calcium-binding 1. (461 aa)
spock3SPARC (osteonectin), cwcv and kazal-like domains proteoglycan 3. (384 aa)
sparcl2SPARC-like 2. (259 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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