STRINGSTRING
ccnt2a ccnt2a ccnt2b ccnt2b ccnt1 ccnt1 slc16a6a slc16a6a gfpt1 gfpt1 cdk9 cdk9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ccnt2aCyclin T2a; Belongs to the cyclin family. (630 aa)
ccnt2bZgc:55690 protein; Belongs to the cyclin family. (569 aa)
ccnt1Cyclin T1; Belongs to the cyclin family. (674 aa)
slc16a6aSolute carrier family 16 member 6a. (495 aa)
gfpt1Glutamine--fructose-6-phosphate transaminase 1. (682 aa)
cdk9Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (393 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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