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maml1 maml1 her15.1 her15.1 cdkn1ba cdkn1ba hif1aa hif1aa spast spast gsk3ba gsk3ba rbpja rbpja ptch1 ptch1 rhoab rhoab jag2b jag2b jag1b jag1b hif1ab hif1ab triob triob shhb shhb numb numb skp2 skp2 serpinf1 serpinf1 cdk4 cdk4 rbpjb rbpjb trioa trioa ptch2 ptch2 cdkn1bb cdkn1bb egf egf gsk3bb gsk3bb notch3 notch3 acta1b acta1b zmp:0000001236 zmp:0000001236 Reln Reln rock1 rock1 ctnnb1 ctnnb1 dab1a dab1a notch1a notch1a foxj1a foxj1a hif1al hif1al numbl numbl rbpjl rbpjl egfra egfra shha shha ENSDARP00000125042 ENSDARP00000125042 jag1a jag1a ncor1 ncor1 tp53 tp53 maml3 maml3 notch2 notch2 foxj1b foxj1b neurog3 neurog3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
maml1Mastermind-like transcriptional coactivator 1. (1057 aa)
her15.1Hairy and enhancer of split-related 15, tandem duplicate 1. (149 aa)
cdkn1baCyclin-dependent kinase inhibitor 1Ba. (187 aa)
hif1aaHypoxia-inducible factor 1 subunit alpha a. (717 aa)
spastSpastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Go [...] (570 aa)
gsk3baGlycogen synthase kinase 3 beta, genome duplicate a; Belongs to the protein kinase superfamily. (421 aa)
rbpjaRecombination signal-binding protein for immunoglobulin kappa J region a. (496 aa)
ptch1Protein patched homolog 1. (1475 aa)
rhoabRho-related GTP-binding protein RhoA-B; Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. (193 aa)
jag2bDelta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1254 aa)
jag1bProtein jagged-1b; Ligand for Notch receptors and involved in the mediation of Notch signaling (By similarity). Seems to be involved in cell-fate decisions. (1213 aa)
hif1abHypoxia-inducible factor 1 subunit alpha b. (777 aa)
triobTrio Rho guanine nucleotide exchange factor b. (2985 aa)
shhbTiggy-winkle hedgehog protein C-product; Intercellular signal essential for a variety of patterning events during development. Involved in dorso-ventral patterning of the brain and in early patterning of the developing eyes. (416 aa)
numbNUMB endocytic adaptor protein. (680 aa)
skp2S-phase kinase-associated protein 2, E3 ubiquitin protein ligase. (410 aa)
serpinf1Zgc:92072; Belongs to the serpin family. (406 aa)
cdk4Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily. (297 aa)
rbpjbRecombination signal-binding protein for immunoglobulin kappa J region b. (491 aa)
trioaTriple functional domain protein; Promotes the exchange of GDP by GTP. Together with leukocyte antigen-related (LAR) protein, it could play a role in coordinating cell-matrix and cytoskeletal rearrangements necessary for cell migration and cell growth (By similarity); Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. (3087 aa)
ptch2Protein patched homolog 1; Acts as a receptor for sonic hedgehog (SHH), indian hedgehog (IHH) and desert hedgehog (DHH). Associates with the smoothened protein (SMO) to transduce the hedgehog's proteins signal (By similarity). Belongs to the patched family. (1442 aa)
cdkn1bbCyclin-dependent kinase inhibitor 1b (P27, kip1). (179 aa)
egfEpidermal growth factor. (1114 aa)
gsk3bbGlycogen synthase kinase 3 beta, genome duplicate b; Belongs to the protein kinase superfamily. (419 aa)
notch3Notch receptor 3. (2468 aa)
acta1bActin alpha 1, skeletal muscle b. (377 aa)
zmp:0000001236MamL-1 domain-containing protein. (892 aa)
RelnReelin domain-containing protein. (259 aa)
rock1Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1359 aa)
ctnnb1Catenin beta-1; Key downstream component of the canonical Wnt signaling pathway (By similarity). In the absence of Wnt, forms a complex with axin1, axin2, apc, csnk1a1 and gsk3b that promotes phosphorylation on N-terminal Ser and Thr residues and ubiquitination of ctnnb1 and its subsequent degradation by the proteasome (By similarity). In the presence of Wnt ligand, ctnnb1 is not ubiquitinated and accumulates in the nucleus, where it acts as a coactivator for transcription factors of the TCF/LEF family, leading to activate Wnt responsive genes (By similarity). Plays a key role in dorso [...] (789 aa)
dab1aDAB adaptor protein 1a. (586 aa)
notch1aNeurogenic locus notch homolog protein 1; Functions as a receptor for membrane-bound ligands Jagged-1 (JAG1), Jagged-2 (JAG2) and Delta-1 (DLL1) to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. Involved in angiogenesis; negatively regulates endothelial cell proliferation and migration and angiogenic sprouting. Involved in the [...] (2438 aa)
foxj1aForkhead box protein J1-A; Key transcription factor required for motile ciliogenesis. Activates genes essential for motile cilia formation and function. Its activity is sufficient for ectopic development of cilia that resemble motile cilia. (458 aa)
hif1alHypoxia-inducible factor 1 subunit alpha,-like. (626 aa)
numblNUMB-like endocytic adaptor protein. (618 aa)
rbpjlRecombination signal-binding protein for immunoglobulin kappa J region-like. (510 aa)
egfraEpidermal growth factor receptor precursor. (625 aa)
shhaSonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). (418 aa)
ENSDARP00000125042Patched 1. (120 aa)
jag1aProtein jagged-1a; Ligand for multiple Notch receptors and involved in the mediation of Notch signaling (By similarity). Seems to be involved in cell-fate decisions. (1253 aa)
ncor1Nuclear receptor corepressor 1. (2398 aa)
tp53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of bax and fas antigen expression, or by repression of Bcl-2 expression. (369 aa)
maml3Mastermind-like transcriptional coactivator 3. (972 aa)
notch2Notch receptor 2. (2475 aa)
foxj1bForkhead box protein J1-B; Key transcription factor required for motile ciliogenesis. Activates genes essential for motile cilia formation and function. Belongs to the FOXJ1 family. (442 aa)
neurog3Neurog3 protein. (208 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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