Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DYNC2H1 | ENSDARP00000125042 | ENSDARP00000152917 | ENSDARP00000125042 | Dynein cytoplasmic 2 heavy chain 1. | Patched 1. | 0.551 |
| DYNC2H1 | gli2a | ENSDARP00000152917 | ENSDARP00000010693 | Dynein cytoplasmic 2 heavy chain 1. | GLI family zinc finger 2a. | 0.767 |
| DYNC2H1 | gli3 | ENSDARP00000152917 | ENSDARP00000058991 | Dynein cytoplasmic 2 heavy chain 1. | GLI family zinc finger 3. | 0.674 |
| DYNC2H1 | ift88 | ENSDARP00000152917 | ENSDARP00000034047 | Dynein cytoplasmic 2 heavy chain 1. | Intraflagellar transport 88 homolog. | 0.918 |
| DYNC2H1 | ptch1 | ENSDARP00000152917 | ENSDARP00000025418 | Dynein cytoplasmic 2 heavy chain 1. | Protein patched homolog 1. | 0.558 |
| DYNC2H1 | ptch2 | ENSDARP00000152917 | ENSDARP00000071771 | Dynein cytoplasmic 2 heavy chain 1. | Protein patched homolog 1; Acts as a receptor for sonic hedgehog (SHH), indian hedgehog (IHH) and desert hedgehog (DHH). Associates with the smoothened protein (SMO) to transduce the hedgehog's proteins signal (By similarity). Belongs to the patched family. | 0.491 |
| DYNC2H1 | shha | ENSDARP00000152917 | ENSDARP00000125090 | Dynein cytoplasmic 2 heavy chain 1. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.511 |
| DYNC2H1 | smo | ENSDARP00000152917 | ENSDARP00000013486 | Dynein cytoplasmic 2 heavy chain 1. | Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.631 |
| DYNC2H1 | ttc21b | ENSDARP00000152917 | ENSDARP00000044269 | Dynein cytoplasmic 2 heavy chain 1. | Tetratricopeptide repeat domain 21B. | 0.874 |
| ENSDARP00000125042 | DYNC2H1 | ENSDARP00000125042 | ENSDARP00000152917 | Patched 1. | Dynein cytoplasmic 2 heavy chain 1. | 0.551 |
| ENSDARP00000125042 | foxa2 | ENSDARP00000125042 | ENSDARP00000007827 | Patched 1. | Forkhead box protein A2; May play a crucial role in specification of both the axial mesendoderm and the ventral nervous system. | 0.424 |
| ENSDARP00000125042 | gli2a | ENSDARP00000125042 | ENSDARP00000010693 | Patched 1. | GLI family zinc finger 2a. | 0.959 |
| ENSDARP00000125042 | gli3 | ENSDARP00000125042 | ENSDARP00000058991 | Patched 1. | GLI family zinc finger 3. | 0.955 |
| ENSDARP00000125042 | ift88 | ENSDARP00000125042 | ENSDARP00000034047 | Patched 1. | Intraflagellar transport 88 homolog. | 0.705 |
| ENSDARP00000125042 | nkx2.2a | ENSDARP00000125042 | ENSDARP00000153588 | Patched 1. | Homeobox protein Nkx-2.2a; Transcriptional activator involved in the development of insulin-producting beta cells in the endocrine pancreas (By similarity). May also be involved in specifying diencephalic neuromeric boundaries, and in controlling the expression of genes that play a role in axonal guidance. Binds to elements within the NEUROD1 promoter (By similarity). | 0.609 |
| ENSDARP00000125042 | olig2 | ENSDARP00000125042 | ENSDARP00000060005 | Patched 1. | Oligodendrocyte lineage transcription factor 2. | 0.491 |
| ENSDARP00000125042 | pax6a | ENSDARP00000125042 | ENSDARP00000135767 | Patched 1. | Paired box protein Pax-6; Transcription factor expressed in spatially restricted regions of the neural tube during embryonic development; Belongs to the paired homeobox family. | 0.572 |
| ENSDARP00000125042 | shha | ENSDARP00000125042 | ENSDARP00000125090 | Patched 1. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.999 |
| ENSDARP00000125042 | smo | ENSDARP00000125042 | ENSDARP00000013486 | Patched 1. | Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.996 |
| foxa2 | ENSDARP00000125042 | ENSDARP00000007827 | ENSDARP00000125042 | Forkhead box protein A2; May play a crucial role in specification of both the axial mesendoderm and the ventral nervous system. | Patched 1. | 0.424 |
page 1 of 8