Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ENSDARP00000125042 | gli2a | ENSDARP00000125042 | ENSDARP00000010693 | Patched 1. | GLI family zinc finger 2a. | 0.959 |
| ENSDARP00000125042 | gli3 | ENSDARP00000125042 | ENSDARP00000058991 | Patched 1. | GLI family zinc finger 3. | 0.955 |
| ENSDARP00000125042 | ift88 | ENSDARP00000125042 | ENSDARP00000034047 | Patched 1. | Intraflagellar transport 88 homolog. | 0.705 |
| ENSDARP00000125042 | rab23 | ENSDARP00000125042 | ENSDARP00000002531 | Patched 1. | RAB23, member RAS oncogene family. | 0.409 |
| ENSDARP00000125042 | shha | ENSDARP00000125042 | ENSDARP00000125090 | Patched 1. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.999 |
| ENSDARP00000125042 | shhb | ENSDARP00000125042 | ENSDARP00000056746 | Patched 1. | Tiggy-winkle hedgehog protein C-product; Intercellular signal essential for a variety of patterning events during development. Involved in dorso-ventral patterning of the brain and in early patterning of the developing eyes. | 0.996 |
| ENSDARP00000125042 | smo | ENSDARP00000125042 | ENSDARP00000013486 | Patched 1. | Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.996 |
| ENSDARP00000125042 | sufu | ENSDARP00000125042 | ENSDARP00000133214 | Patched 1. | Suppressor of fused homolog. | 0.938 |
| arl3b | ift88 | ENSDARP00000096322 | ENSDARP00000034047 | ADP-ribosylation factor-like protein 3; Small GTP-binding protein which cycles between an inactive GDP-bound and an active GTP-bound form, and the rate of cycling is regulated by guanine nucleotide exchange factors (GEF) and GTPase- activating proteins (GAP). Required for normal cytokinesis and cilia signaling. Required for targeting proteins to the ciliary membrane by releasing myristoylated protein from unc119 cargo adapters into the cilium (By similarity). | Intraflagellar transport 88 homolog. | 0.658 |
| arl3b | kif17 | ENSDARP00000096322 | ENSDARP00000108705 | ADP-ribosylation factor-like protein 3; Small GTP-binding protein which cycles between an inactive GDP-bound and an active GTP-bound form, and the rate of cycling is regulated by guanine nucleotide exchange factors (GEF) and GTPase- activating proteins (GAP). Required for normal cytokinesis and cilia signaling. Required for targeting proteins to the ciliary membrane by releasing myristoylated protein from unc119 cargo adapters into the cilium (By similarity). | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.667 |
| arl3b | rab23 | ENSDARP00000096322 | ENSDARP00000002531 | ADP-ribosylation factor-like protein 3; Small GTP-binding protein which cycles between an inactive GDP-bound and an active GTP-bound form, and the rate of cycling is regulated by guanine nucleotide exchange factors (GEF) and GTPase- activating proteins (GAP). Required for normal cytokinesis and cilia signaling. Required for targeting proteins to the ciliary membrane by releasing myristoylated protein from unc119 cargo adapters into the cilium (By similarity). | RAB23, member RAS oncogene family. | 0.741 |
| arl3b | smo | ENSDARP00000096322 | ENSDARP00000013486 | ADP-ribosylation factor-like protein 3; Small GTP-binding protein which cycles between an inactive GDP-bound and an active GTP-bound form, and the rate of cycling is regulated by guanine nucleotide exchange factors (GEF) and GTPase- activating proteins (GAP). Required for normal cytokinesis and cilia signaling. Required for targeting proteins to the ciliary membrane by releasing myristoylated protein from unc119 cargo adapters into the cilium (By similarity). | Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.411 |
| arl3b | sstr3 | ENSDARP00000096322 | ENSDARP00000097945 | ADP-ribosylation factor-like protein 3; Small GTP-binding protein which cycles between an inactive GDP-bound and an active GTP-bound form, and the rate of cycling is regulated by guanine nucleotide exchange factors (GEF) and GTPase- activating proteins (GAP). Required for normal cytokinesis and cilia signaling. Required for targeting proteins to the ciliary membrane by releasing myristoylated protein from unc119 cargo adapters into the cilium (By similarity). | Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family. | 0.562 |
| gli2a | ENSDARP00000125042 | ENSDARP00000010693 | ENSDARP00000125042 | GLI family zinc finger 2a. | Patched 1. | 0.959 |
| gli2a | gli3 | ENSDARP00000010693 | ENSDARP00000058991 | GLI family zinc finger 2a. | GLI family zinc finger 3. | 0.590 |
| gli2a | ift88 | ENSDARP00000010693 | ENSDARP00000034047 | GLI family zinc finger 2a. | Intraflagellar transport 88 homolog. | 0.829 |
| gli2a | ptch1 | ENSDARP00000010693 | ENSDARP00000025418 | GLI family zinc finger 2a. | Protein patched homolog 1. | 0.958 |
| gli2a | ptch2 | ENSDARP00000010693 | ENSDARP00000071771 | GLI family zinc finger 2a. | Protein patched homolog 1; Acts as a receptor for sonic hedgehog (SHH), indian hedgehog (IHH) and desert hedgehog (DHH). Associates with the smoothened protein (SMO) to transduce the hedgehog's proteins signal (By similarity). Belongs to the patched family. | 0.964 |
| gli2a | rab23 | ENSDARP00000010693 | ENSDARP00000002531 | GLI family zinc finger 2a. | RAB23, member RAS oncogene family. | 0.667 |
| gli2a | shha | ENSDARP00000010693 | ENSDARP00000125090 | GLI family zinc finger 2a. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.975 |
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