STRINGSTRING
sufu sufu dgcr8 dgcr8 hnrnpa1b hnrnpa1b ccnd1 ccnd1 hmga2 hmga2 drosha drosha tut4 tut4 lin28b lin28b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sufuSuppressor of fused homolog. (485 aa)
dgcr8DGCR8 microprocessor complex subunit. (782 aa)
hnrnpa1bHeterogeneous nuclear ribonucleoprotein A1b. (403 aa)
ccnd1G1/S-specific cyclin-D1; May play a role in transcriptional regulation (By similarity). Essential for the control of the cell cycle at the G1/S (start) transition. (291 aa)
hmga2High mobility group AT-hook 2. (110 aa)
droshaDrosha ribonuclease III. (1289 aa)
tut4Terminal uridylyl transferase 4. (133 aa)
lin28bLin-28 homolog B (C. elegans). (210 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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